RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 RPS8P62241 208 aaKnown RBP23.84■■□□□ 1.41
COLCA2-201ENST00000398035 SLC4A10Q6U841 1118 aa23.84■■□□□ 1.41
COLCA2-201ENST00000398035 PLA2G12BQ9BX93 195 aa23.84■■□□□ 1.41
COLCA2-201ENST00000398035 SRCIN1Q9C0H9 1055 aa23.84■■□□□ 1.41
COLCA2-201ENST00000398035 SUPT20HQ8NEM7 779 aa23.84■■□□□ 1.41
COLCA2-201ENST00000398035 JARID2Q92833 1246 aaPredicted RBP23.84■■□□□ 1.41
COLCA2-201ENST00000398035 COL11A2P13942 1736 aaPredicted RBP23.83■■□□□ 1.41
COLCA2-201ENST00000398035 KDM2BQ8NHM5 1336 aa23.83■■□□□ 1.41
COLCA2-201ENST00000398035 ANKRD36CQ5JPF3 1778 aa23.83■■□□□ 1.41
COLCA2-201ENST00000398035 PRELPP51888 382 aa23.83■■□□□ 1.4
COLCA2-201ENST00000398035 CTSWP56202 376 aa23.83■■□□□ 1.4
COLCA2-201ENST00000398035 OLFM4Q6UX06 510 aa23.83■■□□□ 1.4
COLCA2-201ENST00000398035 ARFGEF2Q9Y6D5 1785 aa23.82■■□□□ 1.4
COLCA2-201ENST00000398035 TTLL11Q8NHH1 800 aa23.82■■□□□ 1.4
COLCA2-201ENST00000398035 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
COLCA2-201ENST00000398035 TNRC6CQ9HCJ0 1690 aaKnown RBP23.81■■□□□ 1.4
COLCA2-201ENST00000398035 RARSP54136 660 aaKnown RBP23.81■■□□□ 1.4
COLCA2-201ENST00000398035 MPNDQ8N594 471 aa23.81■■□□□ 1.4
COLCA2-201ENST00000398035 CELF1Q92879 486 aaKnown RBP23.81■■□□□ 1.4
COLCA2-201ENST00000398035 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
COLCA2-201ENST00000398035 SLX4Q8IY92 1834 aa23.8■■□□□ 1.4
COLCA2-201ENST00000398035 GLTPD2A6NH11 291 aa23.8■■□□□ 1.4
COLCA2-201ENST00000398035 IARSP41252 1262 aaKnown RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 DPP8Q6V1X1 898 aaPredicted RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 ZNF526Q8TF50 670 aaPredicted RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 JDP2Q8WYK2 163 aa23.8■■□□□ 1.4
COLCA2-201ENST00000398035 CDC5LQ99459 802 aaKnown RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 RTFDC1Q9BY42 306 aaPredicted RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 ZNF277Q9NRM2 450 aaPredicted RBP23.8■■□□□ 1.4
COLCA2-201ENST00000398035 GRM8O00222 908 aa23.79■■□□□ 1.4
COLCA2-201ENST00000398035 CASP7P55210 303 aa23.79■■□□□ 1.4
COLCA2-201ENST00000398035 ANKRD18AQ8IVF6 992 aa23.78■■□□□ 1.4
COLCA2-201ENST00000398035 ARHGAP45Q92619 1136 aa23.78■■□□□ 1.4
COLCA2-201ENST00000398035 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
COLCA2-201ENST00000398035 IPO8O15397 1037 aaKnown RBP23.77■■□□□ 1.4
COLCA2-201ENST00000398035 CSF1RP07333 972 aa23.77■■□□□ 1.4
COLCA2-201ENST00000398035 SEC31BQ9NQW1 1179 aa23.77■■□□□ 1.4
COLCA2-201ENST00000398035 NOB1Q9ULX3 412 aaKnown RBP23.77■■□□□ 1.4
COLCA2-201ENST00000398035 CACNA1FO60840 1977 aa23.77■■□□□ 1.4
COLCA2-201ENST00000398035 KIF16BQ96L93 1317 aa23.76■■□□□ 1.39
COLCA2-201ENST00000398035 RTL9Q8NET4 1388 aa23.76■■□□□ 1.39
COLCA2-201ENST00000398035 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
COLCA2-201ENST00000398035 NSFL1CQ9UNZ2 370 aaKnown RBP23.76■■□□□ 1.39
COLCA2-201ENST00000398035 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
COLCA2-201ENST00000398035 LARGE2Q8N3Y3 721 aa23.75■■□□□ 1.39
COLCA2-201ENST00000398035 BSDC1Q9NW68 430 aaPredicted RBP23.75■■□□□ 1.39
COLCA2-201ENST00000398035 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
COLCA2-201ENST00000398035 GREM2Q9H772 168 aa23.74■■□□□ 1.39
COLCA2-201ENST00000398035 IGHMBP2P38935 993 aaKnown RBP23.73■■□□□ 1.39
COLCA2-201ENST00000398035 PODXL2Q9NZ53 605 aa23.73■■□□□ 1.39
COLCA2-201ENST00000398035 UTYO14607 1347 aa23.72■■□□□ 1.39
COLCA2-201ENST00000398035 FZD9O00144 591 aa23.72■■□□□ 1.39
COLCA2-201ENST00000398035 PPIP5K2O43314 1243 aa23.72■■□□□ 1.39
COLCA2-201ENST00000398035 ANKIB1Q9P2G1 1089 aa23.72■■□□□ 1.39
COLCA2-201ENST00000398035 HDAC5Q9UQL6 1122 aa23.72■■□□□ 1.39
COLCA2-201ENST00000398035 ANKRD18BA2A2Z9 1011 aa23.71■■□□□ 1.39
COLCA2-201ENST00000398035 VEGFAP15692 232 aaPredicted RBP23.71■■□□□ 1.39
COLCA2-201ENST00000398035 ITGA6P23229 1130 aa23.71■■□□□ 1.39
COLCA2-201ENST00000398035 EIF6P56537 245 aaKnown RBP23.71■■□□□ 1.39
COLCA2-201ENST00000398035 IFIT5Q13325 482 aaKnown RBP23.71■■□□□ 1.39
COLCA2-201ENST00000398035 NIM1KQ8IY84 436 aa23.71■■□□□ 1.39
COLCA2-201ENST00000398035 EYA3Q99504 573 aa23.71■■□□□ 1.39
COLCA2-201ENST00000398035 FOXO4P98177 505 aa23.7■■□□□ 1.38
COLCA2-201ENST00000398035 KIAA2012Q0VF49 1180 aa23.7■■□□□ 1.38
COLCA2-201ENST00000398035 WASHC4Q2M389 1173 aa23.7■■□□□ 1.38
COLCA2-201ENST00000398035 MPHOSPH8Q99549 860 aa23.7■■□□□ 1.38
COLCA2-201ENST00000398035 NBPF7P0C2Y1 421 aaPredicted RBP23.69■■□□□ 1.38
COLCA2-201ENST00000398035 GPSM2P81274 684 aa23.69■■□□□ 1.38
COLCA2-201ENST00000398035 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
COLCA2-201ENST00000398035 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
COLCA2-201ENST00000398035 FER1L6Q2WGJ9 1857 aa23.69■■□□□ 1.38
COLCA2-201ENST00000398035 C6orf229H3BNL8 230 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 KIF3CO14782 793 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 LMBR1LQ6UX01 489 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 USP44Q9H0E7 712 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 NMRK2Q9NPI5 230 aa23.68■■□□□ 1.38
COLCA2-201ENST00000398035 AOC3Q16853 763 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 ZC3H12CQ9C0D7 883 aaKnown RBP23.67■■□□□ 1.38
COLCA2-201ENST00000398035 GGA1Q9UJY5 639 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 ZNRF3Q9ULT6 936 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 CHMP3Q9Y3E7 222 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
COLCA2-201ENST00000398035 XDHP47989 1333 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 TOMM70O94826 608 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 DDNO94850 711 aaPredicted RBP23.67■■□□□ 1.38
COLCA2-201ENST00000398035 C1QTNF8P60827 252 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 FAM161AQ3B820 660 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 GPC2Q8N158 579 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 TBC1D16Q8TBP0 767 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 MINPP1Q9UNW1 487 aa23.67■■□□□ 1.38
COLCA2-201ENST00000398035 IQCA1LA6NCM1 817 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 BCAR3O75815 825 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 ATP2B4P23634 1241 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 ATF7IPQ6VMQ6 1270 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 SLC51AQ86UW1 340 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 FRAT1Q92837 279 aaPredicted RBP23.66■■□□□ 1.38
COLCA2-201ENST00000398035 ANKRD2Q9GZV1 360 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 POLLQ9UGP5 575 aa23.66■■□□□ 1.38
COLCA2-201ENST00000398035 L3MBTL3Q96JM7 780 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms