RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 MPNDQ8N594 471 aa24.35■■□□□ 1.49
MCF2L-207ENST00000397024 MYD88Q99836 296 aa24.35■■□□□ 1.49
MCF2L-207ENST00000397024 IRS4O14654 1257 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-207ENST00000397024 ANP32CO43423 234 aa24.34■■□□□ 1.49
MCF2L-207ENST00000397024 ITGBL1O95965 494 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-207ENST00000397024 CCDC30Q5VVM6 783 aa24.34■■□□□ 1.49
MCF2L-207ENST00000397024 DPP8Q6V1X1 898 aaPredicted RBP24.34■■□□□ 1.49
MCF2L-207ENST00000397024 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
MCF2L-207ENST00000397024 CELF1Q92879 486 aaKnown RBP24.34■■□□□ 1.49
MCF2L-207ENST00000397024 COL4A1P02462 1669 aa24.34■■□□□ 1.49
MCF2L-207ENST00000397024 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
MCF2L-207ENST00000397024 VPS33BQ9H267 617 aa24.33■■□□□ 1.49
MCF2L-207ENST00000397024 CLEC11AQ9Y240 323 aa24.33■■□□□ 1.49
MCF2L-207ENST00000397024 PASKQ96RG2 1323 aa24.33■■□□□ 1.48
MCF2L-207ENST00000397024 EPS15P42566 896 aa24.32■■□□□ 1.48
MCF2L-207ENST00000397024 SCNN1DP51172 638 aa24.32■■□□□ 1.48
MCF2L-207ENST00000397024 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
MCF2L-207ENST00000397024 ZBTB38Q8NAP3 1195 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-207ENST00000397024 SUPT20HQ8NEM7 779 aa24.31■■□□□ 1.48
MCF2L-207ENST00000397024 METTL22Q9BUU2 404 aaPredicted RBP24.31■■□□□ 1.48
MCF2L-207ENST00000397024 ADAMTSL1Q8N6G6 1762 aa24.31■■□□□ 1.48
MCF2L-207ENST00000397024 CXCL9Q07325 125 aa24.3■■□□□ 1.48
MCF2L-207ENST00000397024 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
MCF2L-207ENST00000397024 PNMA8AQ86V59 439 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-207ENST00000397024 ZNRF3Q9ULT6 936 aa24.3■■□□□ 1.48
MCF2L-207ENST00000397024 SALL2Q9Y467 1007 aaPredicted RBP24.3■■□□□ 1.48
MCF2L-207ENST00000397024 MAP1SQ66K74 1059 aaPredicted RBP24.29■■□□□ 1.48
MCF2L-207ENST00000397024 G2E3Q7L622 706 aa24.29■■□□□ 1.48
MCF2L-207ENST00000397024 TMC4Q7Z404 712 aa24.29■■□□□ 1.48
MCF2L-207ENST00000397024 CCDC191Q8NCU4 936 aa24.29■■□□□ 1.48
MCF2L-207ENST00000397024 CREBZFQ9NS37 354 aa24.29■■□□□ 1.48
MCF2L-207ENST00000397024 MAP3K2Q9Y2U5 619 aa24.29■■□□□ 1.48
MCF2L-207ENST00000397024 NCBP3Q53F19 620 aaKnown RBP24.28■■□□□ 1.48
MCF2L-207ENST00000397024 CHMP4AQ9BY43 222 aa24.28■■□□□ 1.48
MCF2L-207ENST00000397024 SEC31BQ9NQW1 1179 aa24.28■■□□□ 1.48
MCF2L-207ENST00000397024 IL16Q14005 1332 aa24.28■■□□□ 1.48
MCF2L-207ENST00000397024 PI4KAP2A4QPH2 592 aa24.27■■□□□ 1.48
MCF2L-207ENST00000397024 PCCAP05165 728 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-207ENST00000397024 TWISTNBQ3B726 338 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-207ENST00000397024 KSR2Q6VAB6 950 aa24.27■■□□□ 1.48
MCF2L-207ENST00000397024 CNTROBQ8N137 903 aa24.27■■□□□ 1.48
MCF2L-207ENST00000397024 PI4KAP1Q8N8J0 262 aa24.27■■□□□ 1.48
MCF2L-207ENST00000397024 CWC25Q9NXE8 425 aaPredicted RBP24.27■■□□□ 1.48
MCF2L-207ENST00000397024 DUOX1Q9NRD9 1551 aa24.27■■□□□ 1.48
MCF2L-207ENST00000397024 DDX58O95786 925 aaKnown RBP24.26■■□□□ 1.47
MCF2L-207ENST00000397024 LMOD1P29536 600 aaPredicted RBP24.26■■□□□ 1.47
MCF2L-207ENST00000397024 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
MCF2L-207ENST00000397024 NSFL1CQ9UNZ2 370 aaKnown RBP24.26■■□□□ 1.47
MCF2L-207ENST00000397024 LRRC37AA6NMS7 1700 aa24.26■■□□□ 1.47
MCF2L-207ENST00000397024 YDJCA8MPS7 323 aa24.25■■□□□ 1.47
MCF2L-207ENST00000397024 RAD17O75943 681 aa24.25■■□□□ 1.47
MCF2L-207ENST00000397024 IGKV5-2P06315 115 aa24.25■■□□□ 1.47
MCF2L-207ENST00000397024 GPSM2P81274 684 aa24.25■■□□□ 1.47
MCF2L-207ENST00000397024 POLLQ9UGP5 575 aa24.25■■□□□ 1.47
MCF2L-207ENST00000397024 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
MCF2L-207ENST00000397024 SLC4A2P04920 1241 aa24.24■■□□□ 1.47
MCF2L-207ENST00000397024 IFFO2Q5TF58 517 aa24.24■■□□□ 1.47
MCF2L-207ENST00000397024 GMPSP49915 693 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-207ENST00000397024 CIAPIN1Q6FI81 312 aa24.23■■□□□ 1.47
MCF2L-207ENST00000397024 CCDC85AQ96PX6 553 aaPredicted RBP24.23■■□□□ 1.47
MCF2L-207ENST00000397024 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
MCF2L-207ENST00000397024 GPRC5DQ9NZD1 345 aa24.23■■□□□ 1.47
MCF2L-207ENST00000397024 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
MCF2L-207ENST00000397024 PDE8AO60658 829 aa24.22■■□□□ 1.47
MCF2L-207ENST00000397024 FMR1Q06787 632 aaKnown RBP eCLIP24.22■■□□□ 1.47
MCF2L-207ENST00000397024 TMEM88BA6NKF7 163 aa24.21■■□□□ 1.47
MCF2L-207ENST00000397024 RIMBP2O15034 1052 aa24.21■■□□□ 1.47
MCF2L-207ENST00000397024 WASHC4Q2M389 1173 aa24.21■■□□□ 1.47
MCF2L-207ENST00000397024 CWF19L2Q2TBE0 894 aaKnown RBP24.21■■□□□ 1.47
MCF2L-207ENST00000397024 USP50Q70EL3 339 aaPredicted RBP24.21■■□□□ 1.47
MCF2L-207ENST00000397024 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
MCF2L-207ENST00000397024 GPR101Q96P66 508 aaPredicted RBP24.21■■□□□ 1.47
MCF2L-207ENST00000397024 SPINK5Q9NQ38 1064 aaPredicted RBP24.21■■□□□ 1.47
MCF2L-207ENST00000397024 C6orf229H3BNL8 230 aa24.2■■□□□ 1.46
MCF2L-207ENST00000397024 VAMP4O75379 141 aa24.2■■□□□ 1.46
MCF2L-207ENST00000397024 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.46
MCF2L-207ENST00000397024 TBC1D16Q8TBP0 767 aa24.2■■□□□ 1.46
MCF2L-207ENST00000397024 TNIP1Q15025 636 aa24.19■■□□□ 1.46
MCF2L-207ENST00000397024 CCDC152Q4G0S7 254 aa24.19■■□□□ 1.46
MCF2L-207ENST00000397024 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
MCF2L-207ENST00000397024 DBNDD1Q9H9R9 158 aa24.19■■□□□ 1.46
MCF2L-207ENST00000397024 KCNQ5Q9NR82 932 aa24.19■■□□□ 1.46
MCF2L-207ENST00000397024 ADARB2Q9NS39 739 aaKnown RBP24.19■■□□□ 1.46
MCF2L-207ENST00000397024 CNTNAP1P78357 1384 aa24.18■■□□□ 1.46
MCF2L-207ENST00000397024 CDHR2Q9BYE9 1310 aa24.18■■□□□ 1.46
MCF2L-207ENST00000397024 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
MCF2L-207ENST00000397024 NEURL1BA8MQ27 555 aa24.18■■□□□ 1.46
MCF2L-207ENST00000397024 EXOSC9Q06265 439 aaKnown RBP24.18■■□□□ 1.46
MCF2L-207ENST00000397024 DOK7Q18PE1 504 aa24.18■■□□□ 1.46
MCF2L-207ENST00000397024 HSPA1AP0DMV8 641 aaKnown RBP24.17■■□□□ 1.46
MCF2L-207ENST00000397024 HSPA1BP0DMV9 641 aaKnown RBP24.17■■□□□ 1.46
MCF2L-207ENST00000397024 COL13A1Q5TAT6 717 aaPredicted RBP24.17■■□□□ 1.46
MCF2L-207ENST00000397024 PODXL2Q9NZ53 605 aa24.17■■□□□ 1.46
MCF2L-207ENST00000397024 TRAF5O00463 557 aa24.16■■□□□ 1.46
MCF2L-207ENST00000397024 PSMD14O00487 310 aa24.16■■□□□ 1.46
MCF2L-207ENST00000397024 HIRAP54198 1017 aaPredicted RBP24.16■■□□□ 1.46
MCF2L-207ENST00000397024 NEXNQ0ZGT2 675 aa24.16■■□□□ 1.46
MCF2L-207ENST00000397024 FLIIQ13045 1269 aa24.16■■□□□ 1.46
MCF2L-207ENST00000397024 BCL2L13Q9BXK5 485 aa24.16■■□□□ 1.46
MCF2L-207ENST00000397024 ZBTB12Q9Y330 459 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms