RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 A0A1B0GUL6 1792 aa15.67■□□□□ 0.1
TRIM39-204ENST00000396548 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
TRIM39-204ENST00000396548 FBXO3Q9UK99 471 aa15.67■□□□□ 0.1
TRIM39-204ENST00000396548 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
TRIM39-204ENST00000396548 GREM2Q9H772 168 aa15.67■□□□□ 0.1
TRIM39-204ENST00000396548 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
TRIM39-204ENST00000396548 TNRC6CQ9HCJ0 1690 aaKnown RBP15.66■□□□□ 0.1
TRIM39-204ENST00000396548 ZPR1O75312 459 aa15.66■□□□□ 0.1
TRIM39-204ENST00000396548 ZNF827Q17R98 1081 aa15.66■□□□□ 0.1
TRIM39-204ENST00000396548 SLC10A5Q5PT55 438 aa15.66■□□□□ 0.1
TRIM39-204ENST00000396548 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
TRIM39-204ENST00000396548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
TRIM39-204ENST00000396548 HMGB2P26583 209 aaKnown RBP15.65■□□□□ 0.1
TRIM39-204ENST00000396548 TFCP2Q12800 502 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 TSHZ3Q63HK5 1081 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 AK9Q5TCS8 1911 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 EYA2O00167 538 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 SDSP20132 328 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 OS9Q13438 667 aaPredicted RBP15.65■□□□□ 0.1
TRIM39-204ENST00000396548 LRRC24Q50LG9 513 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 ARAP2Q8WZ64 1704 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 RIC1Q4ADV7 1423 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 TTC41PQ6P2S7 1318 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 PHF14O94880 888 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 ERFEQ4G0M1 354 aa15.65■□□□□ 0.1
TRIM39-204ENST00000396548 CLASRPQ8N2M8 674 aaKnown RBP15.65■□□□□ 0.1
TRIM39-204ENST00000396548 PUS3Q9BZE2 481 aaKnown RBP15.65■□□□□ 0.1
TRIM39-204ENST00000396548 ABCC12Q96J65 1359 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 HCLS1P14317 486 aaPredicted RBP15.64■□□□□ 0.09
TRIM39-204ENST00000396548 RFC4P35249 363 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 GPR108Q9NPR9 543 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 GYS1P13807 737 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 ITGA6P23229 1130 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 IL15P40933 162 aaPredicted RBP15.64■□□□□ 0.09
TRIM39-204ENST00000396548 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 CAMKK2Q96RR4 588 aa15.64■□□□□ 0.09
TRIM39-204ENST00000396548 ZNF609O15014 1411 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 TNNI3KQ59H18 835 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
TRIM39-204ENST00000396548 RIPOR2Q9Y4F9 1068 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 FPGT-TNNI3KV9GXZ4 949 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 IFIT5Q13325 482 aaKnown RBP15.63■□□□□ 0.09
TRIM39-204ENST00000396548 TM4SF1P30408 202 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
TRIM39-204ENST00000396548 TAF1P21675 1872 aa15.62■□□□□ 0.09
TRIM39-204ENST00000396548 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
TRIM39-204ENST00000396548 AACSQ86V21 672 aa15.62■□□□□ 0.09
TRIM39-204ENST00000396548 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
TRIM39-204ENST00000396548 FAM177BA6PVY3 158 aa15.62■□□□□ 0.09
TRIM39-204ENST00000396548 SF3B3Q15393 1217 aaKnown RBP15.62■□□□□ 0.09
TRIM39-204ENST00000396548 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
TRIM39-204ENST00000396548 CARMIL3Q8ND23 1372 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 NFIXQ14938 502 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
TRIM39-204ENST00000396548 BICDL1Q6ZP65 573 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 ECHDC1Q9NTX5 307 aa15.61■□□□□ 0.09
TRIM39-204ENST00000396548 DBNLQ9UJU6 430 aaKnown RBP15.61■□□□□ 0.09
TRIM39-204ENST00000396548 CCDC8Q9H0W5 538 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-204ENST00000396548 BCL11AQ9H165 835 aa15.6■□□□□ 0.09
TRIM39-204ENST00000396548 CDC45O75419 566 aa15.6■□□□□ 0.09
TRIM39-204ENST00000396548 IFIT2P09913 472 aaKnown RBP15.59■□□□□ 0.09
TRIM39-204ENST00000396548 CCDC152Q4G0S7 254 aa15.59■□□□□ 0.09
TRIM39-204ENST00000396548 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
TRIM39-204ENST00000396548 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
TRIM39-204ENST00000396548 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.08
TRIM39-204ENST00000396548 ANKRD31Q8N7Z5 1873 aa15.58■□□□□ 0.08
TRIM39-204ENST00000396548 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.08
TRIM39-204ENST00000396548 EZH2Q15910 746 aaKnown RBP15.58■□□□□ 0.08
TRIM39-204ENST00000396548 NBPF5PQ86XG9 351 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-204ENST00000396548 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
TRIM39-204ENST00000396548 ATP5JP18859 108 aa15.57■□□□□ 0.08
TRIM39-204ENST00000396548 LDHAL6AQ6ZMR3 332 aa15.57■□□□□ 0.08
TRIM39-204ENST00000396548 DBNDD2Q9BQY9 259 aa15.57■□□□□ 0.08
TRIM39-204ENST00000396548 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
TRIM39-204ENST00000396548 EN1Q05925 392 aaPredicted RBP15.56■□□□□ 0.08
TRIM39-204ENST00000396548 DDR1Q08345 913 aa15.56■□□□□ 0.08
TRIM39-204ENST00000396548 ERC2O15083 957 aa15.56■□□□□ 0.08
TRIM39-204ENST00000396548 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
TRIM39-204ENST00000396548 TBC1D32Q96NH3 1257 aa15.56■□□□□ 0.08
TRIM39-204ENST00000396548 TFCP2L1Q9NZI6 479 aa15.56■□□□□ 0.08
TRIM39-204ENST00000396548 TIMM10P62072 90 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
TRIM39-204ENST00000396548 MROH5Q6ZUA9 1318 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 AKAP11Q9UKA4 1901 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 A0A1B0GUL7 405 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 FGFR2P21802 821 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 FLAD1Q8NFF5 587 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 CEP126Q9P2H0 1117 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 CHMLP26374 656 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 TAF7LQ5H9L4 462 aa15.55■□□□□ 0.08
TRIM39-204ENST00000396548 PDE8BO95263 885 aa15.54■□□□□ 0.08
TRIM39-204ENST00000396548 ILDR1Q86SU0 546 aaPredicted RBP15.54■□□□□ 0.08
TRIM39-204ENST00000396548 AKAP2Q9Y2D5 859 aa15.54■□□□□ 0.08
TRIM39-204ENST00000396548 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms