RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ADARB2Q9NS39 739 aaKnown RBP21.14■□□□□ 0.97
DDR1-229ENST00000396342 MBIPQ9NS73 344 aa21.14■□□□□ 0.97
DDR1-229ENST00000396342 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 ATP5J2-PTCD1G3V325 749 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 ITGBL1O95965 494 aaPredicted RBP21.13■□□□□ 0.97
DDR1-229ENST00000396342 DEFB115Q30KQ5 88 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 COL13A1Q5TAT6 717 aaPredicted RBP21.13■□□□□ 0.97
DDR1-229ENST00000396342 CIAPIN1Q6FI81 312 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 EYA3Q99504 573 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 RTFDC1Q9BY42 306 aaPredicted RBP21.13■□□□□ 0.97
DDR1-229ENST00000396342 SCN4AP35499 1836 aa21.13■□□□□ 0.97
DDR1-229ENST00000396342 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
DDR1-229ENST00000396342 CCDC30Q5VVM6 783 aa21.12■□□□□ 0.97
DDR1-229ENST00000396342 NUP98P52948 1817 aa21.12■□□□□ 0.97
DDR1-229ENST00000396342 C6orf229H3BNL8 230 aa21.11■□□□□ 0.97
DDR1-229ENST00000396342 H7C1D1 291 aa21.11■□□□□ 0.97
DDR1-229ENST00000396342 EPS15P42566 896 aa21.11■□□□□ 0.97
DDR1-229ENST00000396342 BEGAINQ9BUH8 593 aa21.11■□□□□ 0.97
DDR1-229ENST00000396342 NSFL1CQ9UNZ2 370 aaKnown RBP21.11■□□□□ 0.97
DDR1-229ENST00000396342 CDHR2Q9BYE9 1310 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 ELL2O00472 640 aaPredicted RBP21.1■□□□□ 0.97
DDR1-229ENST00000396342 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
DDR1-229ENST00000396342 ECE1P42892 770 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
DDR1-229ENST00000396342 WASHC4Q2M389 1173 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 RTL5Q5HYW3 569 aaPredicted RBP21.1■□□□□ 0.97
DDR1-229ENST00000396342 ISCA1Q9BUE6 129 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 STK31Q9BXU1 1019 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 GPRC5DQ9NZD1 345 aa21.1■□□□□ 0.97
DDR1-229ENST00000396342 SCNN1DP51172 638 aa21.09■□□□□ 0.97
DDR1-229ENST00000396342 MAP2K1Q02750 393 aaPredicted RBP21.09■□□□□ 0.97
DDR1-229ENST00000396342 CXCL9Q07325 125 aa21.09■□□□□ 0.97
DDR1-229ENST00000396342 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
DDR1-229ENST00000396342 CTCFP49711 727 aaPredicted RBP21.08■□□□□ 0.97
DDR1-229ENST00000396342 VEGFBP49765 207 aa21.08■□□□□ 0.97
DDR1-229ENST00000396342 GMPSP49915 693 aaPredicted RBP21.08■□□□□ 0.97
DDR1-229ENST00000396342 NEXNQ0ZGT2 675 aa21.08■□□□□ 0.97
DDR1-229ENST00000396342 SF3B3Q15393 1217 aaKnown RBP21.08■□□□□ 0.97
DDR1-229ENST00000396342 SNED1Q8TER0 1413 aa21.07■□□□□ 0.96
DDR1-229ENST00000396342 CAPN15O75808 1086 aa21.07■□□□□ 0.96
DDR1-229ENST00000396342 RAD17O75943 681 aa21.07■□□□□ 0.96
DDR1-229ENST00000396342 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
DDR1-229ENST00000396342 ZBTB38Q8NAP3 1195 aaPredicted RBP21.07■□□□□ 0.96
DDR1-229ENST00000396342 ZNF428Q96B54 188 aa21.07■□□□□ 0.96
DDR1-229ENST00000396342 RASSF10A6NK89 507 aa21.06■□□□□ 0.96
DDR1-229ENST00000396342 RPS8P62241 208 aaKnown RBP21.06■□□□□ 0.96
DDR1-229ENST00000396342 CCDC191Q8NCU4 936 aa21.06■□□□□ 0.96
DDR1-229ENST00000396342 MYD88Q99836 296 aa21.06■□□□□ 0.96
DDR1-229ENST00000396342 ZC3H12CQ9C0D7 883 aaKnown RBP21.06■□□□□ 0.96
DDR1-229ENST00000396342 CWC25Q9NXE8 425 aaPredicted RBP21.06■□□□□ 0.96
DDR1-229ENST00000396342 ANKIB1Q9P2G1 1089 aa21.06■□□□□ 0.96
DDR1-229ENST00000396342 ZNF853P0CG23 659 aa21.05■□□□□ 0.96
DDR1-229ENST00000396342 GRM1Q13255 1194 aa21.05■□□□□ 0.96
DDR1-229ENST00000396342 ZC3H15Q8WU90 426 aaKnown RBP21.05■□□□□ 0.96
DDR1-229ENST00000396342 RIMBP2O15034 1052 aa21.03■□□□□ 0.96
DDR1-229ENST00000396342 CNOT7Q9UIV1 285 aaKnown RBP21.03■□□□□ 0.96
DDR1-229ENST00000396342 WDR33Q9C0J8 1336 aaKnown RBP21.03■□□□□ 0.96
DDR1-229ENST00000396342 PDE8AO60658 829 aa21.02■□□□□ 0.96
DDR1-229ENST00000396342 PCCAP05165 728 aaPredicted RBP21.02■□□□□ 0.96
DDR1-229ENST00000396342 RPS12P25398 132 aaKnown RBP21.02■□□□□ 0.96
DDR1-229ENST00000396342 CDC37L1Q7L3B6 337 aa21.02■□□□□ 0.96
DDR1-229ENST00000396342 CELF1Q92879 486 aaKnown RBP21.02■□□□□ 0.96
DDR1-229ENST00000396342 PHAXQ9H814 394 aaKnown RBP21.02■□□□□ 0.96
DDR1-229ENST00000396342 PRDM10Q9NQV6 1147 aa21.02■□□□□ 0.96
DDR1-229ENST00000396342 ANP32CO43423 234 aa21.01■□□□□ 0.95
DDR1-229ENST00000396342 ANKRD18AQ8IVF6 992 aa21.01■□□□□ 0.95
DDR1-229ENST00000396342 METTL22Q9BUU2 404 aaPredicted RBP21.01■□□□□ 0.95
DDR1-229ENST00000396342 GGA1Q9UJY5 639 aa21.01■□□□□ 0.95
DDR1-229ENST00000396342 FOXN1O15353 648 aa21■□□□□ 0.95
DDR1-229ENST00000396342 CELF2O95319 508 aaKnown RBP21■□□□□ 0.95
DDR1-229ENST00000396342 MICALL2Q8IY33 904 aa21■□□□□ 0.95
DDR1-229ENST00000396342 DPF2Q92785 391 aa21■□□□□ 0.95
DDR1-229ENST00000396342 CDC5LQ99459 802 aaKnown RBP21■□□□□ 0.95
DDR1-229ENST00000396342 ZNF408Q9H9D4 720 aa21■□□□□ 0.95
DDR1-229ENST00000396342 DBNDD1Q9H9R9 158 aa21■□□□□ 0.95
DDR1-229ENST00000396342 UFL1O94874 794 aa20.99■□□□□ 0.95
DDR1-229ENST00000396342 GPSM2P81274 684 aa20.99■□□□□ 0.95
DDR1-229ENST00000396342 C8orf58Q8NAV2 365 aa20.99■□□□□ 0.95
DDR1-229ENST00000396342 CAPNS2Q96L46 248 aa20.99■□□□□ 0.95
DDR1-229ENST00000396342 MAP3K2Q9Y2U5 619 aa20.99■□□□□ 0.95
DDR1-229ENST00000396342 TRAF5O00463 557 aa20.98■□□□□ 0.95
DDR1-229ENST00000396342 ECE2O60344 883 aa20.98■□□□□ 0.95
DDR1-229ENST00000396342 KSR2Q6VAB6 950 aa20.98■□□□□ 0.95
DDR1-229ENST00000396342 SLC51AQ86UW1 340 aa20.98■□□□□ 0.95
DDR1-229ENST00000396342 DCPSQ96C86 337 aaKnown RBP20.98■□□□□ 0.95
DDR1-229ENST00000396342 GPR101Q96P66 508 aaPredicted RBP20.98■□□□□ 0.95
DDR1-229ENST00000396342 WBP1LQ9NX94 342 aa20.98■□□□□ 0.95
DDR1-229ENST00000396342 DOK7Q18PE1 504 aa20.97■□□□□ 0.95
DDR1-229ENST00000396342 CCDC27Q2M243 656 aa20.97■□□□□ 0.95
DDR1-229ENST00000396342 TBC1D16Q8TBP0 767 aa20.97■□□□□ 0.95
DDR1-229ENST00000396342 MRS2Q9HD23 443 aa20.97■□□□□ 0.95
DDR1-229ENST00000396342 TLL2Q9Y6L7 1015 aa20.97■□□□□ 0.95
DDR1-229ENST00000396342 COL4A5P29400 1685 aa20.96■□□□□ 0.95
DDR1-229ENST00000396342 PSMD14O00487 310 aa20.96■□□□□ 0.95
DDR1-229ENST00000396342 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
DDR1-229ENST00000396342 GLIS2Q9BZE0 524 aaPredicted RBP20.96■□□□□ 0.95
DDR1-229ENST00000396342 POLLQ9UGP5 575 aa20.96■□□□□ 0.95
DDR1-229ENST00000396342 MAP2K2P36507 400 aa20.95■□□□□ 0.94
DDR1-229ENST00000396342 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms