RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 SPEF2Q9C093 1822 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 PNPLA7Q6ZV29 1317 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 ST5P78524 1137 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 NFIXQ14938 502 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 CCDC152Q4G0S7 254 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 COL23A1Q86Y22 540 aaPredicted RBP19.04■□□□□ 0.64
VAMP1-202ENST00000396308 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
VAMP1-202ENST00000396308 NOP58Q9Y2X3 529 aaKnown RBP19.04■□□□□ 0.64
VAMP1-202ENST00000396308 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
VAMP1-202ENST00000396308 NUTM1Q86Y26 1132 aa19.03■□□□□ 0.64
VAMP1-202ENST00000396308 COPRSQ9NQ92 184 aa19.03■□□□□ 0.64
VAMP1-202ENST00000396308 RIC1Q4ADV7 1423 aa19.02■□□□□ 0.64
VAMP1-202ENST00000396308 CSF1RP07333 972 aa19.02■□□□□ 0.64
VAMP1-202ENST00000396308 HCLS1P14317 486 aaPredicted RBP19.02■□□□□ 0.64
VAMP1-202ENST00000396308 FAM161AQ3B820 660 aa19.02■□□□□ 0.64
VAMP1-202ENST00000396308 ERFEQ4G0M1 354 aa19.02■□□□□ 0.64
VAMP1-202ENST00000396308 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
VAMP1-202ENST00000396308 TTLL11Q8NHH1 800 aa19.01■□□□□ 0.63
VAMP1-202ENST00000396308 SIL1Q9H173 461 aa19.01■□□□□ 0.63
VAMP1-202ENST00000396308 FBXO3Q9UK99 471 aa19.01■□□□□ 0.63
VAMP1-202ENST00000396308 RTL9Q8NET4 1388 aa19.01■□□□□ 0.63
VAMP1-202ENST00000396308 NRXN2Q9P2S2 1712 aa19■□□□□ 0.63
VAMP1-202ENST00000396308 SYNE4Q8N205 404 aa19■□□□□ 0.63
VAMP1-202ENST00000396308 RHPN1Q8TCX5 695 aa19■□□□□ 0.63
VAMP1-202ENST00000396308 NLRP3Q96P20 1036 aa19■□□□□ 0.63
VAMP1-202ENST00000396308 BCL11AQ9H165 835 aa19■□□□□ 0.63
VAMP1-202ENST00000396308 PA2G4Q9UQ80 394 aaKnown RBP19■□□□□ 0.63
VAMP1-202ENST00000396308 TNRC6CQ9HCJ0 1690 aaKnown RBP18.99■□□□□ 0.63
VAMP1-202ENST00000396308 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
VAMP1-202ENST00000396308 ITGA6P23229 1130 aa18.99■□□□□ 0.63
VAMP1-202ENST00000396308 RFX5P48382 616 aaPredicted RBP18.99■□□□□ 0.63
VAMP1-202ENST00000396308 SLC10A5Q5PT55 438 aa18.99■□□□□ 0.63
VAMP1-202ENST00000396308 CLASRPQ8N2M8 674 aaKnown RBP18.99■□□□□ 0.63
VAMP1-202ENST00000396308 CCDC85AQ96PX6 553 aaPredicted RBP18.99■□□□□ 0.63
VAMP1-202ENST00000396308 CDC5LQ99459 802 aaKnown RBP18.99■□□□□ 0.63
VAMP1-202ENST00000396308 PARP3Q9Y6F1 533 aa18.99■□□□□ 0.63
VAMP1-202ENST00000396308 CIAO1O76071 339 aa18.98■□□□□ 0.63
VAMP1-202ENST00000396308 SERPINB2P05120 415 aa18.98■□□□□ 0.63
VAMP1-202ENST00000396308 IL15P40933 162 aaPredicted RBP18.98■□□□□ 0.63
VAMP1-202ENST00000396308 PTPN12Q05209 780 aaKnown RBP18.98■□□□□ 0.63
VAMP1-202ENST00000396308 GPATCH3Q96I76 525 aa18.98■□□□□ 0.63
VAMP1-202ENST00000396308 GREM2Q9H772 168 aa18.98■□□□□ 0.63
VAMP1-202ENST00000396308 SMARCA5O60264 1052 aaPredicted RBP18.97■□□□□ 0.63
VAMP1-202ENST00000396308 TM4SF1P30408 202 aa18.97■□□□□ 0.63
VAMP1-202ENST00000396308 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
VAMP1-202ENST00000396308 KLHDC4Q8TBB5 520 aa18.97■□□□□ 0.63
VAMP1-202ENST00000396308 EYA2O00167 538 aa18.96■□□□□ 0.63
VAMP1-202ENST00000396308 POLRMTO00411 1230 aaKnown RBP18.96■□□□□ 0.63
VAMP1-202ENST00000396308 SF3B3Q15393 1217 aaKnown RBP18.96■□□□□ 0.63
VAMP1-202ENST00000396308 MPHOSPH8Q99549 860 aa18.96■□□□□ 0.63
VAMP1-202ENST00000396308 CNNM1Q9NRU3 951 aa18.96■□□□□ 0.63
VAMP1-202ENST00000396308 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
VAMP1-202ENST00000396308 PRR5LQ6MZQ0 368 aa18.95■□□□□ 0.62
VAMP1-202ENST00000396308 SLC16A10Q8TF71 515 aa18.95■□□□□ 0.62
VAMP1-202ENST00000396308 IL1RAPL2Q9NP60 686 aa18.95■□□□□ 0.62
VAMP1-202ENST00000396308 MMP10P09238 476 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 PDE4AP27815 886 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 DDR1Q08345 913 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 MSL1Q68DK7 614 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 LDHAL6AQ6ZMR3 332 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 RPGRQ92834 1020 aaKnown RBP18.94■□□□□ 0.62
VAMP1-202ENST00000396308 AK9Q5TCS8 1911 aa18.94■□□□□ 0.62
VAMP1-202ENST00000396308 ANKRD31Q8N7Z5 1873 aa18.93■□□□□ 0.62
VAMP1-202ENST00000396308 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
VAMP1-202ENST00000396308 SKAP1Q86WV1 359 aa18.93■□□□□ 0.62
VAMP1-202ENST00000396308 ANKRD18AQ8IVF6 992 aa18.93■□□□□ 0.62
VAMP1-202ENST00000396308 ZNF594Q96JF6 807 aaPredicted RBP18.93■□□□□ 0.62
VAMP1-202ENST00000396308 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
VAMP1-202ENST00000396308 A0A1B0GUL6 1792 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 MX1P20591 662 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 METTL24Q5JXM2 366 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 AACSQ86V21 672 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 AKAP2Q9Y2D5 859 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 AOX1Q06278 1338 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 MROH5Q6ZUA9 1318 aa18.92■□□□□ 0.62
VAMP1-202ENST00000396308 SASH1O94885 1247 aa18.91■□□□□ 0.62
VAMP1-202ENST00000396308 ARAP2Q8WZ64 1704 aa18.91■□□□□ 0.62
VAMP1-202ENST00000396308 TFCP2Q12800 502 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 ATG9AQ7Z3C6 839 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 CCDC24Q8N4L8 307 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 GPR108Q9NPR9 543 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 TAF1P21675 1872 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 ZNF609O15014 1411 aa18.9■□□□□ 0.62
VAMP1-202ENST00000396308 ERC2O15083 957 aa18.89■□□□□ 0.61
VAMP1-202ENST00000396308 PDE6BP35913 854 aa18.89■□□□□ 0.61
VAMP1-202ENST00000396308 LRRC24Q50LG9 513 aa18.89■□□□□ 0.61
VAMP1-202ENST00000396308 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
VAMP1-202ENST00000396308 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
VAMP1-202ENST00000396308 TTC41PQ6P2S7 1318 aa18.89■□□□□ 0.61
VAMP1-202ENST00000396308 TNNI3KQ59H18 835 aa18.88■□□□□ 0.61
VAMP1-202ENST00000396308 PUS3Q9BZE2 481 aaKnown RBP18.88■□□□□ 0.61
VAMP1-202ENST00000396308 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
VAMP1-202ENST00000396308 FPGT-TNNI3KV9GXZ4 949 aa18.88■□□□□ 0.61
VAMP1-202ENST00000396308 PDE1AP54750 535 aa18.87■□□□□ 0.61
VAMP1-202ENST00000396308 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
VAMP1-202ENST00000396308 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
VAMP1-202ENST00000396308 C3orf67Q6ZVT6 689 aa18.87■□□□□ 0.61
VAMP1-202ENST00000396308 C16orf71Q8IYS4 520 aaPredicted RBP18.87■□□□□ 0.61
VAMP1-202ENST00000396308 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms