RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 ZNF622Q969S3 477 aaKnown RBP eCLIP8.45□□□□□ -1.06
LMO3-205ENST00000396205 KIAA2012Q0VF49 1180 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 TRMT112Q9UI30 125 aaKnown RBP8.45□□□□□ -1.06
LMO3-205ENST00000396205 ZNF330Q9Y3S2 320 aaPredicted RBP8.45□□□□□ -1.06
LMO3-205ENST00000396205 POTECB2RU33 542 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 DPY19L2Q6NUT2 758 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 SRCAPQ6ZRS2 3230 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 MED23Q9ULK4 1368 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 PRKCSHP14314 528 aaPredicted RBP8.44□□□□□ -1.06
LMO3-205ENST00000396205 NEXNQ0ZGT2 675 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 CCDC152Q4G0S7 254 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 C3orf67Q6ZVT6 689 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
LMO3-205ENST00000396205 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 SMC1BQ8NDV3 1235 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 PHAXQ9H814 394 aaKnown RBP8.44□□□□□ -1.06
LMO3-205ENST00000396205 COL1A1P02452 1464 aaPredicted RBP8.44□□□□□ -1.06
LMO3-205ENST00000396205 HSPA6P17066 643 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 APLP1P51693 650 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 NUTM1Q86Y26 1132 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 ARHGAP45Q92619 1136 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 PGAP2Q9UHJ9 254 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 KIF16BQ96L93 1317 aa8.44□□□□□ -1.06
LMO3-205ENST00000396205 VEGFAP15692 232 aaPredicted RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 BEND3Q5T5X7 828 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 SYNE4Q8N205 404 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 DNAAF4Q8WXU2 420 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 TSR2Q969E8 191 aaKnown RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 MAP3K2Q9Y2U5 619 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 IRS4O14654 1257 aaPredicted RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 CTSWP56202 376 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 GCKRQ14397 625 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 PAPPA2Q9BXP8 1791 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 NPHP1O15259 732 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 GPTP24298 496 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 RPS12P25398 132 aaKnown RBP8.43□□□□□ -1.06
LMO3-205ENST00000396205 SCN9AQ15858 1988 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 PASKQ96RG2 1323 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 IRS2Q9Y4H2 1338 aa8.43□□□□□ -1.06
LMO3-205ENST00000396205 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 BSDC1Q9NW68 430 aaPredicted RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 PI4KAP2A4QPH2 592 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 EXOSC9Q06265 439 aaKnown RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 PNMA8AQ86V59 439 aaPredicted RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 PI4KAP1Q8N8J0 262 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 ANXA1P04083 346 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 FKBP1AP62942 108 aaKnown RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 RABL6Q3YEC7 729 aaPredicted RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 LDHDQ86WU2 507 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 EYA3Q99504 573 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 MYD88Q99836 296 aa8.42□□□□□ -1.06
LMO3-205ENST00000396205 TMX4Q9H1E5 349 aaPredicted RBP8.42□□□□□ -1.06
LMO3-205ENST00000396205 USP50Q70EL3 339 aaPredicted RBP8.41□□□□□ -1.06
LMO3-205ENST00000396205 CDC5LQ99459 802 aaKnown RBP8.41□□□□□ -1.06
LMO3-205ENST00000396205 AIMP1Q12904 312 aaKnown RBP8.41□□□□□ -1.06
LMO3-205ENST00000396205 TTLL11Q8NHH1 800 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
LMO3-205ENST00000396205 DPF2Q92785 391 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 FBXO3Q9UK99 471 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 ZNRF3Q9ULT6 936 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 MYH13Q9UKX3 1938 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 XDHP47989 1333 aa8.41□□□□□ -1.06
LMO3-205ENST00000396205 RPS8P62241 208 aaKnown RBP8.4□□□□□ -1.06
LMO3-205ENST00000396205 MPNDQ8N594 471 aa8.4□□□□□ -1.06
LMO3-205ENST00000396205 JMYQ8N9B5 988 aa8.4□□□□□ -1.06
LMO3-205ENST00000396205 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
LMO3-205ENST00000396205 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
LMO3-205ENST00000396205 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.06
LMO3-205ENST00000396205 TNIP1Q15025 636 aa8.4□□□□□ -1.07
LMO3-205ENST00000396205 FAM89AQ96GI7 184 aa8.4□□□□□ -1.07
LMO3-205ENST00000396205 MAST2Q6P0Q8 1798 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 ZBED9Q6R2W3 1325 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 MYO3BQ8WXR4 1341 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 EIF6P56537 245 aaKnown RBP8.39□□□□□ -1.07
LMO3-205ENST00000396205 FOXO4P98177 505 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 DPP8Q6V1X1 898 aaPredicted RBP8.39□□□□□ -1.07
LMO3-205ENST00000396205 G2E3Q7L622 706 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 NIM1KQ8IY84 436 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 JDP2Q8WYK2 163 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 ANKRD2Q9GZV1 360 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 TAF1DQ9H5J8 278 aaPredicted RBP8.39□□□□□ -1.07
LMO3-205ENST00000396205 NMRK2Q9NPI5 230 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 HACL1Q9UJ83 578 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
LMO3-205ENST00000396205 HCLS1P14317 486 aaPredicted RBP8.38□□□□□ -1.07
LMO3-205ENST00000396205 HDAC5Q9UQL6 1122 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 TBC1D16Q8TBP0 767 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 CELF1Q92879 486 aaKnown RBP8.38□□□□□ -1.07
LMO3-205ENST00000396205 GRM8O00222 908 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 IGSF3O75054 1194 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 VIL1P09327 827 aaKnown RBP8.38□□□□□ -1.07
LMO3-205ENST00000396205 SCNN1DP51172 638 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 ANKRD18AQ8IVF6 992 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms