RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 PPP1R9BQ96SB3 815 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 ATRNO75882 1429 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 BTAF1O14981 1849 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 CPA1P15085 419 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
HIF1A-203ENST00000394997 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
HIF1A-203ENST00000394997 ATP5JP18859 108 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 NEK4P51957 841 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
HIF1A-203ENST00000394997 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
HIF1A-203ENST00000394997 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
HIF1A-203ENST00000394997 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 MYD88Q99836 296 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
HIF1A-203ENST00000394997 TNNI3KQ59H18 835 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 VGLL2Q8N8G2 317 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 FUCA2Q9BTY2 467 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 FPGT-TNNI3KV9GXZ4 949 aa12.42□□□□□ -0.42
HIF1A-203ENST00000394997 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
HIF1A-203ENST00000394997 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 AGXT2Q9BYV1 514 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 TAF5LO75529 589 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 MYL6BP14649 208 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 EVI5LQ96CN4 794 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 UPF3BQ9BZI7 483 aaKnown RBP12.41□□□□□ -0.42
HIF1A-203ENST00000394997 ISY1Q9ULR0 285 aaKnown RBP12.41□□□□□ -0.42
HIF1A-203ENST00000394997 MYH13Q9UKX3 1938 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 MAST2Q6P0Q8 1798 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
HIF1A-203ENST00000394997 CSF1RP07333 972 aa12.4□□□□□ -0.42
HIF1A-203ENST00000394997 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
HIF1A-203ENST00000394997 STOX1Q6ZVD7 989 aa12.4□□□□□ -0.42
HIF1A-203ENST00000394997 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
HIF1A-203ENST00000394997 HAUS7Q99871 368 aa12.4□□□□□ -0.42
HIF1A-203ENST00000394997 SALL1Q9NSC2 1324 aa12.4□□□□□ -0.42
HIF1A-203ENST00000394997 NUCB2P80303 420 aa12.4□□□□□ -0.43
HIF1A-203ENST00000394997 TFCP2Q12800 502 aa12.4□□□□□ -0.43
HIF1A-203ENST00000394997 ATG3Q9NT62 314 aa12.4□□□□□ -0.43
HIF1A-203ENST00000394997 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.43
HIF1A-203ENST00000394997 SLC27A2O14975 620 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 MCM2P49736 904 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
HIF1A-203ENST00000394997 ME3Q16798 604 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 CWC27Q6UX04 472 aaKnown RBP12.39□□□□□ -0.43
HIF1A-203ENST00000394997 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 VPS53Q5VIR6 699 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 CNTROBQ8N137 903 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
HIF1A-203ENST00000394997 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 ANO2Q9NQ90 1003 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 ST18O60284 1047 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 A1BGP04217 495 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 SLFNL1Q499Z3 407 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 ERC1Q8IUD2 1116 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 GPR108Q9NPR9 543 aa12.39□□□□□ -0.43
HIF1A-203ENST00000394997 PIGBQ92521 554 aa12.38□□□□□ -0.43
HIF1A-203ENST00000394997 CCDC8Q9H0W5 538 aaPredicted RBP12.38□□□□□ -0.43
HIF1A-203ENST00000394997 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
HIF1A-203ENST00000394997 CREB3L3Q68CJ9 461 aa12.38□□□□□ -0.43
HIF1A-203ENST00000394997 AACSQ86V21 672 aa12.38□□□□□ -0.43
HIF1A-203ENST00000394997 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
HIF1A-203ENST00000394997 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
HIF1A-203ENST00000394997 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
HIF1A-203ENST00000394997 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
HIF1A-203ENST00000394997 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
HIF1A-203ENST00000394997 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
HIF1A-203ENST00000394997 IL2RBP14784 551 aa12.37□□□□□ -0.43
HIF1A-203ENST00000394997 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
HIF1A-203ENST00000394997 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 MPNDQ8N594 471 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 DBNDD2Q9BQY9 259 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 C9orf78Q9NZ63 289 aaPredicted RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 MTMR6Q9Y217 621 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 CIAO1O76071 339 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 FOXD4L6Q3SYB3 417 aaPredicted RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 LRRC24Q50LG9 513 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 FOXD4L3Q6VB84 417 aaPredicted RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 CLCN1P35523 988 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 TICAM2Q86XR7 235 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 SEC62Q99442 399 aaKnown RBP12.36□□□□□ -0.43
HIF1A-203ENST00000394997 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
HIF1A-203ENST00000394997 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
HIF1A-203ENST00000394997 CLASRPQ8N2M8 674 aaKnown RBP12.35□□□□□ -0.43
HIF1A-203ENST00000394997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms