RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
VSIR-201ENST00000394957 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
VSIR-201ENST00000394957 KRT18P05783 430 aaKnown RBP16.92■□□□□ 0.3
VSIR-201ENST00000394957 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
VSIR-201ENST00000394957 AIDAQ96BJ3 306 aa16.92■□□□□ 0.3
VSIR-201ENST00000394957 PTPRMP28827 1452 aa16.92■□□□□ 0.3
VSIR-201ENST00000394957 CLTCQ00610 1675 aaKnown RBP16.92■□□□□ 0.3
VSIR-201ENST00000394957 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
VSIR-201ENST00000394957 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
VSIR-201ENST00000394957 BAG6P46379 1132 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 CEP120Q8N960 986 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
VSIR-201ENST00000394957 CCAR1Q8IX12 1150 aaKnown RBP16.91■□□□□ 0.3
VSIR-201ENST00000394957 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
VSIR-201ENST00000394957 USP8P40818 1118 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 ZFYVE27Q5T4F4 411 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
VSIR-201ENST00000394957 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 RASSF4Q9H2L5 321 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
VSIR-201ENST00000394957 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 CEP152O94986 1710 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 GRM8O00222 908 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 CDKL5O76039 1030 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 MAP3K12Q12852 859 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
VSIR-201ENST00000394957 OGFRQ9NZT2 677 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 ZMYM4Q5VZL5 1548 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 SPATA31A3Q5VYP0 1347 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 GNPATO15228 680 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 FAM177A1Q8N128 213 aaPredicted RBP16.9■□□□□ 0.3
VSIR-201ENST00000394957 SMARCE1Q969G3 411 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 YY1AP1Q9H869 796 aa16.9■□□□□ 0.3
VSIR-201ENST00000394957 SSFA2P28290 1259 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
VSIR-201ENST00000394957 VAMP4O75379 141 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 CAMK4Q16566 473 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 CCDC91Q7Z6B0 441 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
VSIR-201ENST00000394957 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
VSIR-201ENST00000394957 TNNT1P13805 278 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 TRERF1Q96PN7 1200 aa16.89■□□□□ 0.29
VSIR-201ENST00000394957 KIDINS220Q9ULH0 1771 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 ODF2Q5BJF6 829 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 ZSCAN29Q8IWY8 852 aaPredicted RBP16.88■□□□□ 0.29
VSIR-201ENST00000394957 CEP57L1Q8IYX8 460 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 WDR17Q8IZU2 1322 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 PARP10Q53GL7 1025 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 SOGA3Q5TF21 947 aa16.88■□□□□ 0.29
VSIR-201ENST00000394957 GEMIN8Q9NWZ8 242 aaKnown RBP16.88■□□□□ 0.29
VSIR-201ENST00000394957 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
VSIR-201ENST00000394957 LDHCP07864 332 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 DZIP1Q86YF9 867 aaKnown RBP16.87■□□□□ 0.29
VSIR-201ENST00000394957 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 CCDC82Q8N4S0 544 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 MINDY4BA8MYZ0 360 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 CHL1O00533 1208 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
VSIR-201ENST00000394957 NOL7Q9UMY1 257 aaKnown RBP16.87■□□□□ 0.29
VSIR-201ENST00000394957 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 PPFIBP1Q86W92 1011 aa16.87■□□□□ 0.29
VSIR-201ENST00000394957 SSBP05455 408 aaKnown RBP eCLIP16.86■□□□□ 0.29
VSIR-201ENST00000394957 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
VSIR-201ENST00000394957 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
VSIR-201ENST00000394957 PHKG2P15735 406 aa16.86■□□□□ 0.29
VSIR-201ENST00000394957 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
VSIR-201ENST00000394957 TTF1Q15361 905 aaPredicted RBP16.85■□□□□ 0.29
VSIR-201ENST00000394957 GDPD2Q9HCC8 539 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
VSIR-201ENST00000394957 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
VSIR-201ENST00000394957 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
VSIR-201ENST00000394957 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 ZNHIT6Q9NWK9 470 aaKnown RBP16.85■□□□□ 0.29
VSIR-201ENST00000394957 RXRBP28702 533 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 LGR6Q9HBX8 967 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
VSIR-201ENST00000394957 E9PCH4 1651 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 APBA3O96018 575 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 STIM1Q13586 685 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 FLAD1Q8NFF5 587 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
VSIR-201ENST00000394957 CCDC112Q8NEF3 446 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 MEIS3Q99687 375 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 THRAP3Q9Y2W1 955 aaKnown RBP16.84■□□□□ 0.29
VSIR-201ENST00000394957 NAPBQ9H115 298 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
VSIR-201ENST00000394957 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.29
VSIR-201ENST00000394957 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.29
VSIR-201ENST00000394957 UNC5CLQ8IV45 518 aa16.83■□□□□ 0.29
VSIR-201ENST00000394957 DACH1Q9UI36 760 aa16.83■□□□□ 0.29
VSIR-201ENST00000394957 CCP110O43303 1012 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms