RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 AOPEPQ8N6M6 819 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 PSD3Q9NYI0 1048 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 PHLPP2Q6ZVD8 1323 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 URI1O94763 535 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 ATP2B1P20020 1258 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 NOM1Q5C9Z4 860 aaKnown RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 LARP1Q6PKG0 1096 aaKnown RBP8.39□□□□□ -1.07
NPHP1-203ENST00000393272 PRAM1Q96QH2 718 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 FUT8Q9BYC5 575 aa8.39□□□□□ -1.07
NPHP1-203ENST00000393272 CHD2O14647 1828 aaKnown RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 ADGRL3Q9HAR2 1447 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 CCT4P50991 539 aaKnown RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 PTH1RQ03431 593 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 E2F4Q16254 413 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 FBXW7Q969H0 707 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 CYP46A1Q9Y6A2 500 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 EIF3CLB5ME19 914 aaKnown RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 PDCP20941 246 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 SFPQP23246 707 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 LEKR1Q6ZMV7 388 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 EP400NLQ6ZTU2 488 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 EIF3CQ99613 913 aaKnown RBP8.38□□□□□ -1.07
NPHP1-203ENST00000393272 ZSWIM6Q9HCJ5 1215 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 ARFGAP3Q9NP61 516 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 STK26Q9P289 416 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
NPHP1-203ENST00000393272 ANKRD65E5RJM6 399 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 CLGNO14967 610 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 IVLP07476 585 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 LRRFIP1Q32MZ4 808 aaKnown RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 TRIM65Q6PJ69 517 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 TMC6Q7Z403 805 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 HDGFL2Q7Z4V5 671 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 CCDC150Q8NCX0 1101 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 ERCC4Q92889 916 aaPredicted RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 IMPACTQ9P2X3 320 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 TPM1P09493 284 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 BRD2P25440 801 aaKnown RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 KCNJ6P48051 423 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 ATP8B2P98198 1209 aa8.37□□□□□ -1.07
NPHP1-203ENST00000393272 GNL2Q13823 731 aaKnown RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 SRRTQ9BXP5 876 aaKnown RBP8.37□□□□□ -1.07
NPHP1-203ENST00000393272 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CHL1O00533 1208 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 RAB11FIP3O75154 756 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 SMC2O95347 1197 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 TUBB4AP04350 444 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 MCM10Q7L590 875 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CEP57L1Q8IYX8 460 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 TCEANC2Q96MN5 208 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 XPO4Q9C0E2 1151 aaKnown RBP8.36□□□□□ -1.07
NPHP1-203ENST00000393272 DEF6Q9H4E7 631 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 VPS18Q9P253 973 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CLTCQ00610 1675 aaKnown RBP8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CEBPZQ03701 1054 aaKnown RBP8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
NPHP1-203ENST00000393272 TM6SF1Q9BZW5 370 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 GOLPH3LQ9H4A5 285 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 CRYBG1Q9Y4K1 1723 aa8.36□□□□□ -1.07
NPHP1-203ENST00000393272 SOS1Q07889 1333 aaPredicted RBP8.36□□□□□ -1.07
NPHP1-203ENST00000393272 LONRF2Q1L5Z9 754 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 AXDND1Q5T1B0 1012 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-203ENST00000393272 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 DDX11Q96FC9 970 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 PARD6BQ9BYG5 372 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 ANO10Q9NW15 660 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 CABP1Q9NZU7 370 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 IFNKQ9P0W0 207 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 ATP7BP35670 1465 aa8.35□□□□□ -1.07
NPHP1-203ENST00000393272 FAM177A1Q8N128 213 aaPredicted RBP8.35□□□□□ -1.07
NPHP1-203ENST00000393272 CTAGE5O15320 804 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 CCDC172P0C7W6 258 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 CORO7P57737 925 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 RESTQ13127 1097 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 STK3Q13188 491 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 CCAR1Q8IX12 1150 aaKnown RBP8.34□□□□□ -1.07
NPHP1-203ENST00000393272 FTOQ9C0B1 505 aaKnown RBP eCLIP8.34□□□□□ -1.07
NPHP1-203ENST00000393272 ZSCAN16Q9H4T2 348 aaPredicted RBP8.34□□□□□ -1.07
NPHP1-203ENST00000393272 CEP83Q9Y592 693 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 NPATQ14207 1427 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 PTPRMP28827 1452 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 NRDCO43847 1150 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 RSRC2Q7L4I2 434 aaKnown RBP8.34□□□□□ -1.07
NPHP1-203ENST00000393272 BANK1Q8NDB2 785 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 PDE11AQ9HCR9 933 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 MIS18AQ9NYP9 233 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 MYH15Q9Y2K3 1946 aa8.34□□□□□ -1.07
NPHP1-203ENST00000393272 MAP2K7O14733 419 aa8.33□□□□□ -1.08
NPHP1-203ENST00000393272 JAK2O60674 1132 aa8.33□□□□□ -1.08
NPHP1-203ENST00000393272 KINO60870 393 aaKnown RBP8.33□□□□□ -1.08
NPHP1-203ENST00000393272 N4BP1O75113 896 aaKnown RBP8.33□□□□□ -1.08
NPHP1-203ENST00000393272 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms