RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 NECTIN1Q15223 517 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 NUTM2DQ5VT03 806 aaPredicted RBP4.09□□□□□ -1.75
TRAV39-201ENST00000390466 CEP135Q66GS9 1140 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 FAM173BQ6P4H8 233 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 TRIM65Q6PJ69 517 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 CCDC83Q8IWF9 413 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 REXO1L1PQ8IX06 675 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 DHX40Q8IX18 779 aaKnown RBP4.09□□□□□ -1.75
TRAV39-201ENST00000390466 CCDC112Q8NEF3 446 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 LEO1Q8WVC0 666 aaPredicted RBP4.09□□□□□ -1.75
TRAV39-201ENST00000390466 USP44Q9H0E7 712 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 DDX19AQ9NUU7 478 aaKnown RBP4.09□□□□□ -1.75
TRAV39-201ENST00000390466 SLC52A1Q9NWF4 448 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 CALCOCO1Q9P1Z2 691 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 TAF6LQ9Y6J9 622 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 MAP3K19Q56UN5 1328 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 NPHP3Q7Z494 1330 aa4.09□□□□□ -1.75
TRAV39-201ENST00000390466 RGPD5Q99666 1765 aa4.09□□□□□ -1.76
TRAV39-201ENST00000390466 CCDC69A6NI79 296 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 APBB1O00213 710 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 NEMFO60524 1076 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 NR1I2O75469 434 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 SASH3O75995 380 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 NFAT5O94916 1531 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 SLU7O95391 586 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 TBC1D8O95759 1140 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 IFIT2P09913 472 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 CHGAP10645 457 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 KIF1AQ12756 1690 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 CHAF1AQ13111 956 aaPredicted RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 MTX1Q13505 466 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 TOB2Q14106 344 aaPredicted RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 RRS1Q15050 365 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ARMCX5Q6P1M9 558 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ADAMTS13Q76LX8 1427 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 IGSF1Q8N6C5 1336 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ENGASEQ8NFI3 743 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ZSCAN31Q96LW9 406 aaPredicted RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 LARP6Q9BRS8 491 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 DNAJC25Q9H1X3 360 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 HSD3B7Q9H2F3 369 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 SALL1Q9NSC2 1324 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 DACT1Q9NYF0 836 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ORC3Q9UBD5 711 aaPredicted RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 TPCN1Q9ULQ1 816 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 SMC3Q9UQE7 1217 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 ATP6V1DQ9Y5K8 247 aa4.08□□□□□ -1.76
TRAV39-201ENST00000390466 LRRFIP2Q9Y608 721 aaKnown RBP4.08□□□□□ -1.76
TRAV39-201ENST00000390466 DOCK2Q92608 1830 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 TRPM3Q9HCF6 1732 aaPredicted RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 BCL9LQ86UU0 1499 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PXDNQ92626 1479 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 SBNO1A3KN83 1393 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 METP08581 1390 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 CEMIPQ8WUJ3 1361 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PLEKHG2Q9H7P9 1386 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 TTC41PQ6P2S7 1318 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PHLPP2Q6ZVD8 1323 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PSDA5PKW4 1024 aaPredicted RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 FOXO3O43524 673 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RAB11FIP3O75154 756 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RPS6KA5O75582 802 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 CAVIN2O95810 425 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 ATXN8OSP0DMR3 200 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PDIA4P13667 645 aaKnown RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 CASTP20810 708 aaKnown RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 ZNF165P49910 485 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 HAP1P54257 671 aaPredicted RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 KRT85P78386 507 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 ST5P78524 1137 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 FLIIQ13045 1269 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 SNW1Q13573 536 aaKnown RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 NCAPHQ15003 741 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 ERCC6LQ2NKX8 1250 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RNF20Q5VTR2 975 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RSRC2Q7L4I2 434 aaKnown RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 MCM10Q7L590 875 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 TMEM139Q8IV31 216 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 CKAP2LQ8IYA6 745 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 NECAB1Q8N987 351 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 NEK11Q8NG66 645 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 SMARCC2Q8TAQ2 1214 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RHPN1Q8TCX5 695 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PPP1R13BQ96KQ4 1090 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 DNAJC2Q99543 621 aaKnown RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 GOLPH3LQ9H4A5 285 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 YY1AP1Q9H869 796 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 IL1RAPL2Q9NP60 686 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 PSD3Q9NYI0 1048 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 STK26Q9P289 416 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 LCMT1Q9UIC8 334 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 USP16Q9Y5T5 823 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 V9GYY5 206 aaPredicted RBP4.07□□□□□ -1.76
TRAV39-201ENST00000390466 BCORQ6W2J9 1755 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 DLEC1Q9Y238 1755 aa4.07□□□□□ -1.76
TRAV39-201ENST00000390466 RFX7Q2KHR2 1363 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms