RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 CDHR2Q9BYE9 1310 aa23.33■■□□□ 1.32
RPUSD3-201ENST00000383820 KIAA2012Q0VF49 1180 aa23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 DDX10Q13206 875 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 HDGFL1Q5TGJ6 251 aa23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 CHPF2Q9P2E5 772 aa23.32■■□□□ 1.32
RPUSD3-201ENST00000383820 TRPM7Q96QT4 1865 aa23.31■■□□□ 1.32
RPUSD3-201ENST00000383820 DBF4Q9UBU7 674 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-201ENST00000383820 LAS1LQ9Y4W2 734 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-201ENST00000383820 WDR33Q9C0J8 1336 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-201ENST00000383820 MAP2K1Q02750 393 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-201ENST00000383820 CIAPIN1Q6FI81 312 aa23.3■■□□□ 1.32
RPUSD3-201ENST00000383820 ANKRD13DQ6ZTN6 518 aa23.3■■□□□ 1.32
RPUSD3-201ENST00000383820 LRRC37AA6NMS7 1700 aa23.29■■□□□ 1.32
RPUSD3-201ENST00000383820 TNIP1Q15025 636 aa23.29■■□□□ 1.32
RPUSD3-201ENST00000383820 CFAP44Q96MT7 982 aa23.29■■□□□ 1.32
RPUSD3-201ENST00000383820 ISCA1Q9BUE6 129 aa23.29■■□□□ 1.32
RPUSD3-201ENST00000383820 DDX60Q8IY21 1712 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-201ENST00000383820 HYPKQ9NX55 129 aa23.28■■□□□ 1.32
RPUSD3-201ENST00000383820 ADAMTS8Q9UP79 889 aa23.28■■□□□ 1.32
RPUSD3-201ENST00000383820 THSD7BQ9C0I4 1608 aa23.27■■□□□ 1.32
RPUSD3-201ENST00000383820 ECE1P42892 770 aa23.27■■□□□ 1.32
RPUSD3-201ENST00000383820 GMPSP49915 693 aaPredicted RBP23.27■■□□□ 1.32
RPUSD3-201ENST00000383820 PGAP2Q9UHJ9 254 aa23.27■■□□□ 1.32
RPUSD3-201ENST00000383820 FMR1Q06787 632 aaKnown RBP eCLIP23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 TRIM28Q13263 835 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 SF3B3Q15393 1217 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 CST9Q5W186 159 aa23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 TAF1P21675 1872 aa23.26■■□□□ 1.31
RPUSD3-201ENST00000383820 TRAF5O00463 557 aa23.25■■□□□ 1.31
RPUSD3-201ENST00000383820 LBX1P52954 281 aa23.25■■□□□ 1.31
RPUSD3-201ENST00000383820 CAPNS2Q96L46 248 aa23.25■■□□□ 1.31
RPUSD3-201ENST00000383820 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
RPUSD3-201ENST00000383820 TLL2Q9Y6L7 1015 aa23.25■■□□□ 1.31
RPUSD3-201ENST00000383820 RAD17O75943 681 aa23.24■■□□□ 1.31
RPUSD3-201ENST00000383820 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
RPUSD3-201ENST00000383820 FAM89AQ96GI7 184 aa23.24■■□□□ 1.31
RPUSD3-201ENST00000383820 HSPA8P11142 646 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-201ENST00000383820 ATP5J2-PTCD1G3V325 749 aa23.22■■□□□ 1.31
RPUSD3-201ENST00000383820 MBIPQ9NS73 344 aa23.22■■□□□ 1.31
RPUSD3-201ENST00000383820 YDJCA8MPS7 323 aa23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 WASHC4Q2M389 1173 aa23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 PAXIP1Q6ZW49 1069 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 GPR101Q96P66 508 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 CNOT7Q9UIV1 285 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-201ENST00000383820 CALD1Q05682 793 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-201ENST00000383820 CYP4F22Q6NT55 531 aa23.2■■□□□ 1.3
RPUSD3-201ENST00000383820 DPF2Q92785 391 aa23.2■■□□□ 1.3
RPUSD3-201ENST00000383820 HHIPL1Q96JK4 782 aa23.2■■□□□ 1.3
RPUSD3-201ENST00000383820 NSFL1CQ9UNZ2 370 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-201ENST00000383820 H7C1D1 291 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 CELF2O95319 508 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 HSP90B1P14625 803 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 MAP2K2P36507 400 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 HIRAP54198 1017 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 CDC37L1Q7L3B6 337 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 SAPCD2Q86UD0 394 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 BEGAINQ9BUH8 593 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 GLIS2Q9BZE0 524 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
RPUSD3-201ENST00000383820 GNAI1P63096 354 aa23.18■■□□□ 1.3
RPUSD3-201ENST00000383820 GOLGA2Q08379 1002 aa23.18■■□□□ 1.3
RPUSD3-201ENST00000383820 ZNF428Q96B54 188 aa23.18■■□□□ 1.3
RPUSD3-201ENST00000383820 EYA3Q99504 573 aa23.18■■□□□ 1.3
RPUSD3-201ENST00000383820 RIC3Q7Z5B4 369 aa23.17■■□□□ 1.3
RPUSD3-201ENST00000383820 ZBTB38Q8NAP3 1195 aaPredicted RBP23.17■■□□□ 1.3
RPUSD3-201ENST00000383820 TRPM4Q8TD43 1214 aa23.17■■□□□ 1.3
RPUSD3-201ENST00000383820 C6orf229H3BNL8 230 aa23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 RPS12P25398 132 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 RPS8P62241 208 aaKnown RBP23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 GPSM2P81274 684 aa23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 MICALL2Q8IY33 904 aa23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 POLLQ9UGP5 575 aa23.16■■□□□ 1.3
RPUSD3-201ENST00000383820 PSMD14O00487 310 aa23.15■■□□□ 1.3
RPUSD3-201ENST00000383820 GRM1Q13255 1194 aa23.15■■□□□ 1.3
RPUSD3-201ENST00000383820 RTL5Q5HYW3 569 aaPredicted RBP23.15■■□□□ 1.3
RPUSD3-201ENST00000383820 DBNDD1Q9H9R9 158 aa23.15■■□□□ 1.3
RPUSD3-201ENST00000383820 COL4A1P02462 1669 aa23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 APAF1O14727 1248 aa23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 CCDC191Q8NCU4 936 aa23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 PHAXQ9H814 394 aaKnown RBP23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 PODXL2Q9NZ53 605 aa23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 ZBTB12Q9Y330 459 aaPredicted RBP23.14■■□□□ 1.29
RPUSD3-201ENST00000383820 SHTN1A0MZ66 631 aa23.13■■□□□ 1.29
RPUSD3-201ENST00000383820 RIMBP2O15034 1052 aa23.13■■□□□ 1.29
RPUSD3-201ENST00000383820 ECE2O60344 883 aa23.13■■□□□ 1.29
RPUSD3-201ENST00000383820 TBC1D16Q8TBP0 767 aa23.13■■□□□ 1.29
RPUSD3-201ENST00000383820 CA12O43570 354 aa23.12■■□□□ 1.29
RPUSD3-201ENST00000383820 PCCAP05165 728 aaPredicted RBP23.12■■□□□ 1.29
RPUSD3-201ENST00000383820 AOC2O75106 756 aa23.11■■□□□ 1.29
RPUSD3-201ENST00000383820 MYD88Q99836 296 aa23.11■■□□□ 1.29
RPUSD3-201ENST00000383820 ZC3H12CQ9C0D7 883 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms