RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 RABL6Q3YEC7 729 aaPredicted RBP10.67□□□□□ -0.7
GPNMB-202ENST00000381990 EPHA10Q5JZY3 1008 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 PI4K2BQ8TCG2 481 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 CASP7P55210 303 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 USP48Q86UV5 1035 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 RILPL2Q969X0 211 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 ATP6V1DQ9Y5K8 247 aa10.67□□□□□ -0.7
GPNMB-202ENST00000381990 NUTM2BA6NNL0 878 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 NUTM2EB1AL46 878 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 CHMLP26374 656 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 NUTM2AQ8IVF1 878 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 ANO2Q9NQ90 1003 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 CWC25Q9NXE8 425 aaPredicted RBP10.66□□□□□ -0.7
GPNMB-202ENST00000381990 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 H7C1W4 665 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 UBE2HP62256 183 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 DMTNQ08495 405 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 CCDC191Q8NCU4 936 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 GPATCH3Q96I76 525 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 SLIT2O94813 1529 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 SPATA31A5Q5VU36 1347 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 SPATA31A7Q8IWB4 1347 aa10.66□□□□□ -0.7
GPNMB-202ENST00000381990 GLRX3O76003 335 aaKnown RBP10.65□□□□□ -0.7
GPNMB-202ENST00000381990 SASH1O94885 1247 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 DDB1Q16531 1140 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 UNC5CLQ8IV45 518 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 ZBTB3Q9H5J0 574 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.7
GPNMB-202ENST00000381990 ADCY5O95622 1261 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 IFIT2P09913 472 aaKnown RBP10.65□□□□□ -0.7
GPNMB-202ENST00000381990 JARID2Q92833 1246 aaPredicted RBP10.65□□□□□ -0.7
GPNMB-202ENST00000381990 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 ECHDC1Q9NTX5 307 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 PALD1Q9ULE6 856 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 DOT1LQ8TEK3 1739 aa10.65□□□□□ -0.7
GPNMB-202ENST00000381990 TJP1Q07157 1748 aa10.65□□□□□ -0.71
GPNMB-202ENST00000381990 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.71
GPNMB-202ENST00000381990 RFX5P48382 616 aaPredicted RBP10.65□□□□□ -0.71
GPNMB-202ENST00000381990 CHAF1AQ13111 956 aaPredicted RBP10.65□□□□□ -0.71
GPNMB-202ENST00000381990 USP25Q9UHP3 1055 aa10.65□□□□□ -0.71
GPNMB-202ENST00000381990 KDM4AO75164 1064 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
GPNMB-202ENST00000381990 HSPA4P34932 840 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 AACSQ86V21 672 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 CNTROBQ8N137 903 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 SYTL4Q96C24 671 aaPredicted RBP10.64□□□□□ -0.71
GPNMB-202ENST00000381990 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
GPNMB-202ENST00000381990 SIL1Q9H173 461 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
GPNMB-202ENST00000381990 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 ISCA1Q9BUE6 129 aa10.64□□□□□ -0.71
GPNMB-202ENST00000381990 ZSCAN22P10073 491 aaPredicted RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 PTPN12Q05209 780 aaKnown RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 TRIM28Q13263 835 aaKnown RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 KLHDC4Q8TBB5 520 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 EAF2Q96CJ1 260 aaPredicted RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 FOXO4P98177 505 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 ZNF710Q8N1W2 664 aa10.63□□□□□ -0.71
GPNMB-202ENST00000381990 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
GPNMB-202ENST00000381990 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.62□□□□□ -0.71
GPNMB-202ENST00000381990 ZNF330Q9Y3S2 320 aaPredicted RBP10.62□□□□□ -0.71
GPNMB-202ENST00000381990 KIF20AO95235 890 aa10.62□□□□□ -0.71
GPNMB-202ENST00000381990 MAP4K4O95819 1239 aaPredicted RBP10.62□□□□□ -0.71
GPNMB-202ENST00000381990 GDPD2Q9HCC8 539 aa10.62□□□□□ -0.71
GPNMB-202ENST00000381990 MAP3K15Q6ZN16 1313 aa10.62□□□□□ -0.71
GPNMB-202ENST00000381990 HCLS1P14317 486 aaPredicted RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 KIAA1524Q8TCG1 905 aa10.61□□□□□ -0.71
GPNMB-202ENST00000381990 UPF3BQ9BZI7 483 aaKnown RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 TTC12Q9H892 705 aaPredicted RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 JCADQ9P266 1359 aa10.61□□□□□ -0.71
GPNMB-202ENST00000381990 RAD50Q92878 1312 aa10.61□□□□□ -0.71
GPNMB-202ENST00000381990 STX6O43752 255 aa10.61□□□□□ -0.71
GPNMB-202ENST00000381990 FUCA2Q9BTY2 467 aa10.61□□□□□ -0.71
GPNMB-202ENST00000381990 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
GPNMB-202ENST00000381990 GIGYF2Q6Y7W6 1299 aaKnown RBP10.6□□□□□ -0.71
GPNMB-202ENST00000381990 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 HSP90AB3PQ58FF7 597 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 NOL8Q76FK4 1167 aaKnown RBP10.6□□□□□ -0.71
GPNMB-202ENST00000381990 EVI5LQ96CN4 794 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 ZNF830Q96NB3 372 aaPredicted RBP10.6□□□□□ -0.71
GPNMB-202ENST00000381990 TCHHQ07283 1943 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 SGSM2O43147 1006 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 F13A1P00488 732 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 PCCAP05165 728 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms