RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-203ENST00000380877 SYCE3A1L190 88 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 SLF2Q8IX21 1173 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-203ENST00000380877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
GABPB1-203ENST00000380877 ABCA6Q8N139 1617 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 SMC2O95347 1197 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 TIMM10P62072 90 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 NYXQ9GZU5 481 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 SH3TC1Q8TE82 1336 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 PPRC1Q5VV67 1664 aaKnown RBP14.34□□□□□ -0.11
GABPB1-203ENST00000380877 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
GABPB1-203ENST00000380877 SPTY2D1Q68D10 685 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-203ENST00000380877 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
GABPB1-203ENST00000380877 MCM5P33992 734 aa14.33□□□□□ -0.11
GABPB1-203ENST00000380877 FAM98CQ17RN3 349 aaKnown RBP14.33□□□□□ -0.11
GABPB1-203ENST00000380877 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 ERBB3P21860 1342 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 CYP7A1P22680 504 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 MICU3Q86XE3 530 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 USP26Q9BXU7 913 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 LRRC2Q9BYS8 371 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 BAG3O95817 575 aa14.33□□□□□ -0.12
GABPB1-203ENST00000380877 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
GABPB1-203ENST00000380877 CRACR2BQ8N4Y2 399 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-203ENST00000380877 MAP3K11Q16584 847 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 GNPATO15228 680 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-203ENST00000380877 MPHOSPH10O00566 681 aaKnown RBP14.32□□□□□ -0.12
GABPB1-203ENST00000380877 PDILTQ8N807 584 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 CEP89Q96ST8 783 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 DBNDD2Q9BQY9 259 aa14.32□□□□□ -0.12
GABPB1-203ENST00000380877 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 TNNI3KQ59H18 835 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 FPGT-TNNI3KV9GXZ4 949 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 A0A1B0GUL7 405 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
GABPB1-203ENST00000380877 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 ZNF622Q969S3 477 aaKnown RBP eCLIP14.31□□□□□ -0.124e-7■■□□□ 12.1
GABPB1-203ENST00000380877 TFIP11Q9UBB9 837 aaKnown RBP14.31□□□□□ -0.12
GABPB1-203ENST00000380877 NEURL1BA8MQ27 555 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-203ENST00000380877 IARSP41252 1262 aaKnown RBP14.31□□□□□ -0.12
GABPB1-203ENST00000380877 CEP57L1Q8IYX8 460 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-203ENST00000380877 RAD50Q92878 1312 aa14.31□□□□□ -0.12
GABPB1-203ENST00000380877 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 ITGA6P23229 1130 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 SPC24Q8NBT2 197 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 BRPF1P55201 1214 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CAMK4Q16566 473 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 ZNF594Q96JF6 807 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CCDC87Q9NVE4 849 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 METAP2P50579 478 aaKnown RBP eCLIP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 SSRP1Q08945 709 aaKnown RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CREB3L3Q68CJ9 461 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CCNL1Q9UK58 526 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CAMSAP1Q5T5Y3 1602 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 PDE4BQ07343 736 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 NAA16Q6N069 864 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CARD10Q9BWT7 1032 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 CEP131Q9UPN4 1083 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 AOX1Q06278 1338 aa14.3□□□□□ -0.12
GABPB1-203ENST00000380877 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
GABPB1-203ENST00000380877 TSPY2A6NKD2 308 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 FILIP1LQ4L180 1135 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 MPNDQ8N594 471 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 NOC3LQ8WTT2 800 aaKnown RBP14.29□□□□□ -0.12
GABPB1-203ENST00000380877 KRT18P05783 430 aaKnown RBP14.29□□□□□ -0.12
GABPB1-203ENST00000380877 CCDC171Q6TFL3 1326 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 CCDC183Q5T5S1 534 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 PDE8AO60658 829 aa14.29□□□□□ -0.12
GABPB1-203ENST00000380877 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
GABPB1-203ENST00000380877 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
GABPB1-203ENST00000380877 SERPINC1P01008 464 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 KIDINS220Q9ULH0 1771 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 Q6ZUG5 572 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
GABPB1-203ENST00000380877 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
GABPB1-203ENST00000380877 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.12
GABPB1-203ENST00000380877 AK2P54819 239 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 TCIRG1Q13488 830 aa14.27□□□□□ -0.12
GABPB1-203ENST00000380877 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms