RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 ERC2O15083 957 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 ST18O60284 1047 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 SDSP20132 328 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBD-203ENST00000377050 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 MEIS3Q99687 375 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
UBD-203ENST00000377050 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
UBD-203ENST00000377050 ANAPC15P60006 121 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 ATP8B2P98198 1209 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 EYA1Q99502 592 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 STK31Q9BXU1 1019 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 STAP2Q9UGK3 403 aa13.54□□□□□ -0.24
UBD-203ENST00000377050 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
UBD-203ENST00000377050 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
UBD-203ENST00000377050 HOXB7P09629 217 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 DDR1Q08345 913 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 IFNL2Q8IZJ0 200 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 TTLL6Q8N841 843 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 BEGAINQ9BUH8 593 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 PASKQ96RG2 1323 aa13.53□□□□□ -0.24
UBD-203ENST00000377050 USP42Q9H9J4 1324 aaKnown RBP13.53□□□□□ -0.24
UBD-203ENST00000377050 IQCA1LA6NCM1 817 aa13.52□□□□□ -0.25
UBD-203ENST00000377050 PDE1AP54750 535 aa13.52□□□□□ -0.25
UBD-203ENST00000377050 KRT24Q2M2I5 525 aa13.52□□□□□ -0.25
UBD-203ENST00000377050 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
UBD-203ENST00000377050 LDHDQ86WU2 507 aa13.52□□□□□ -0.25
UBD-203ENST00000377050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBD-203ENST00000377050 POLRMTO00411 1230 aaKnown RBP13.51□□□□□ -0.25
UBD-203ENST00000377050 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
UBD-203ENST00000377050 CLCN1P35523 988 aa13.51□□□□□ -0.25
UBD-203ENST00000377050 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
UBD-203ENST00000377050 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
UBD-203ENST00000377050 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
UBD-203ENST00000377050 PHKG2P15735 406 aa13.5□□□□□ -0.25
UBD-203ENST00000377050 ZNF445P59923 1031 aa13.5□□□□□ -0.25
UBD-203ENST00000377050 FLIIQ13045 1269 aa13.5□□□□□ -0.25
UBD-203ENST00000377050 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
UBD-203ENST00000377050 DEFB115Q30KQ5 88 aa13.5□□□□□ -0.25
UBD-203ENST00000377050 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
UBD-203ENST00000377050 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 SCN4AP35499 1836 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 NFKBIEO00221 500 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 ZPR1O75312 459 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 MCCP23508 829 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 G2E3Q7L622 706 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
UBD-203ENST00000377050 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
UBD-203ENST00000377050 H0YIN7 160 aa13.48□□□□□ -0.25
UBD-203ENST00000377050 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
UBD-203ENST00000377050 INTS4Q96HW7 963 aaKnown RBP13.48□□□□□ -0.25
UBD-203ENST00000377050 SLC4A9Q96Q91 983 aa13.48□□□□□ -0.25
UBD-203ENST00000377050 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
UBD-203ENST00000377050 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 ERVV-2B6SEH9 535 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 TM4SF1P30408 202 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
UBD-203ENST00000377050 CUL4AQ13619 759 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
UBD-203ENST00000377050 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
UBD-203ENST00000377050 RRAGDQ9NQL2 400 aaPredicted RBP13.47□□□□□ -0.25
UBD-203ENST00000377050 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.25
UBD-203ENST00000377050 MX1P20591 662 aa13.46□□□□□ -0.25
UBD-203ENST00000377050 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
UBD-203ENST00000377050 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
UBD-203ENST00000377050 ABT1Q9ULW3 272 aaKnown RBP13.46□□□□□ -0.25
UBD-203ENST00000377050 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
UBD-203ENST00000377050 NRXN2Q9P2S2 1712 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 FER1L6Q2WGJ9 1857 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 SMARCA5O60264 1052 aaPredicted RBP13.45□□□□□ -0.26
UBD-203ENST00000377050 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 EAPPQ56P03 285 aaPredicted RBP13.45□□□□□ -0.26
UBD-203ENST00000377050 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 TAOK3Q9H2K8 898 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 HDAC5Q9UQL6 1122 aa13.45□□□□□ -0.26
UBD-203ENST00000377050 ITGBL1O95965 494 aaPredicted RBP13.44□□□□□ -0.26
UBD-203ENST00000377050 CHMLP26374 656 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 ECE1P42892 770 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
UBD-203ENST00000377050 HS1BP3Q53T59 392 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 PAXIP1Q6ZW49 1069 aaPredicted RBP13.44□□□□□ -0.26
UBD-203ENST00000377050 TAF1DQ9H5J8 278 aaPredicted RBP13.44□□□□□ -0.26
UBD-203ENST00000377050 LMBRD1Q9NUN5 540 aa13.44□□□□□ -0.26
UBD-203ENST00000377050 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
UBD-203ENST00000377050 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms