RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 NHSQ6T4R5 1651 aa20.38■□□□□ 0.85
HLA-A-202ENST00000376806 LAMB2P55268 1798 aa20.38■□□□□ 0.85
HLA-A-202ENST00000376806 BTAF1O14981 1849 aa20.38■□□□□ 0.85
HLA-A-202ENST00000376806 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
HLA-A-202ENST00000376806 IL15P40933 162 aaPredicted RBP20.38■□□□□ 0.85
HLA-A-202ENST00000376806 FAM89AQ96GI7 184 aa20.38■□□□□ 0.85
HLA-A-202ENST00000376806 EYA2O00167 538 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 HIP1O00291 1037 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 CIAO1O76071 339 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 HSP90AA1P07900 732 aaKnown RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 ATP5JP18859 108 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 GPR108Q9NPR9 543 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 HSPA4P34932 840 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 CRKLP46109 303 aaKnown RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 ITPK1Q13572 414 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 SMARCC1Q92922 1105 aaPredicted RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 ZNF594Q96JF6 807 aaPredicted RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
HLA-A-202ENST00000376806 CIZ1Q9ULV3 898 aaPredicted RBP20.37■□□□□ 0.85
HLA-A-202ENST00000376806 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
HLA-A-202ENST00000376806 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
HLA-A-202ENST00000376806 CCDC57Q2TAC2 916 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 LRRC24Q50LG9 513 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 KIAA1211Q6ZU35 1233 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 DDX60Q8IY21 1712 aaKnown RBP20.35■□□□□ 0.85
HLA-A-202ENST00000376806 KCNQ2O43526 872 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 CSF1RP07333 972 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 FSD1Q9BTV5 496 aa20.35■□□□□ 0.85
HLA-A-202ENST00000376806 LRP5O75197 1615 aa20.34■□□□□ 0.85
HLA-A-202ENST00000376806 UBN2Q6ZU65 1347 aa20.34■□□□□ 0.85
HLA-A-202ENST00000376806 RFX7Q2KHR2 1363 aa20.34■□□□□ 0.85
HLA-A-202ENST00000376806 FOXD4L1Q9NU39 408 aa20.34■□□□□ 0.85
HLA-A-202ENST00000376806 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
HLA-A-202ENST00000376806 NEK4P51957 841 aa20.33■□□□□ 0.85
HLA-A-202ENST00000376806 NMIQ13287 307 aaPredicted RBP20.33■□□□□ 0.85
HLA-A-202ENST00000376806 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
HLA-A-202ENST00000376806 SYNE4Q8N205 404 aa20.33■□□□□ 0.84
HLA-A-202ENST00000376806 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.84
HLA-A-202ENST00000376806 SCN7AQ01118 1682 aa20.32■□□□□ 0.84
HLA-A-202ENST00000376806 RIC1Q4ADV7 1423 aa20.32■□□□□ 0.84
HLA-A-202ENST00000376806 SBF2Q86WG5 1849 aa20.32■□□□□ 0.84
HLA-A-202ENST00000376806 SNRKQ9NRH2 765 aa20.32■□□□□ 0.84
HLA-A-202ENST00000376806 CASZ1Q86V15 1759 aa20.31■□□□□ 0.84
HLA-A-202ENST00000376806 CTSWP56202 376 aa20.31■□□□□ 0.84
HLA-A-202ENST00000376806 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
HLA-A-202ENST00000376806 FAM227BQ96M60 508 aa20.31■□□□□ 0.84
HLA-A-202ENST00000376806 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
HLA-A-202ENST00000376806 HAUS7Q99871 368 aa20.31■□□□□ 0.84
HLA-A-202ENST00000376806 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
HLA-A-202ENST00000376806 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
HLA-A-202ENST00000376806 IRS4O14654 1257 aaPredicted RBP20.3■□□□□ 0.84
HLA-A-202ENST00000376806 CCDC171Q6TFL3 1326 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 A0A0D9SFI3 127 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 MCM2P49736 904 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 TAF7LQ5H9L4 462 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 EDC3Q96F86 508 aaKnown RBP20.3■□□□□ 0.84
HLA-A-202ENST00000376806 NEUROD6Q96NK8 337 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 SNX14Q9Y5W7 946 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 ARAP2Q8WZ64 1704 aa20.3■□□□□ 0.84
HLA-A-202ENST00000376806 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
HLA-A-202ENST00000376806 PTH1RQ03431 593 aa20.29■□□□□ 0.84
HLA-A-202ENST00000376806 DNAJC2Q99543 621 aaKnown RBP20.29■□□□□ 0.84
HLA-A-202ENST00000376806 LY75O60449 1722 aa20.29■□□□□ 0.84
HLA-A-202ENST00000376806 A0A1B0GUL7 405 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 PDE8AO60658 829 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 TIMM10P62072 90 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 RAB3GAP1Q15042 981 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 GREM2Q9H772 168 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 MYH7P12883 1935 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 TAF1LQ8IZX4 1826 aa20.28■□□□□ 0.84
HLA-A-202ENST00000376806 ITGA6P23229 1130 aa20.27■□□□□ 0.84
HLA-A-202ENST00000376806 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
HLA-A-202ENST00000376806 NDUFB9Q9Y6M9 179 aa20.27■□□□□ 0.84
HLA-A-202ENST00000376806 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
HLA-A-202ENST00000376806 ANKRD18BA2A2Z9 1011 aa20.26■□□□□ 0.83
HLA-A-202ENST00000376806 FAM196AQ6ZSG2 479 aa20.26■□□□□ 0.83
HLA-A-202ENST00000376806 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
HLA-A-202ENST00000376806 AKAP2Q9Y2D5 859 aa20.26■□□□□ 0.83
HLA-A-202ENST00000376806 MCM4P33991 863 aa20.25■□□□□ 0.83
HLA-A-202ENST00000376806 PARP10Q53GL7 1025 aa20.25■□□□□ 0.83
HLA-A-202ENST00000376806 KCNB2Q92953 911 aa20.25■□□□□ 0.83
HLA-A-202ENST00000376806 AK7Q96M32 723 aa20.25■□□□□ 0.83
HLA-A-202ENST00000376806 SH3TC1Q8TE82 1336 aa20.25■□□□□ 0.83
HLA-A-202ENST00000376806 DEKP35659 375 aaKnown RBP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 SUSD4Q5VX71 490 aa20.24■□□□□ 0.83
HLA-A-202ENST00000376806 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
HLA-A-202ENST00000376806 TNPO1Q92973 898 aaKnown RBP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 TMX3Q96JJ7 454 aa20.24■□□□□ 0.83
HLA-A-202ENST00000376806 CNTNAP4Q9C0A0 1308 aa20.24■□□□□ 0.83
HLA-A-202ENST00000376806 PRPF40BQ6NWY9 871 aaKnown RBP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.24■□□□□ 0.83
HLA-A-202ENST00000376806 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms