RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 TPTE2Q6XPS3 522 aa26.24■■□□□ 1.79
HLA-C-201ENST00000376228 SSH3Q8TE77 659 aa26.24■■□□□ 1.79
HLA-C-201ENST00000376228 IGKV5-2P06315 115 aa26.24■■□□□ 1.79
HLA-C-201ENST00000376228 MTX1Q13505 466 aa26.24■■□□□ 1.79
HLA-C-201ENST00000376228 LNPKQ9C0E8 428 aa26.24■■□□□ 1.79
HLA-C-201ENST00000376228 NUTM1Q86Y26 1132 aa26.23■■□□□ 1.79
HLA-C-201ENST00000376228 ZNF34Q8IZ26 560 aa26.23■■□□□ 1.79
HLA-C-201ENST00000376228 ZNF622Q969S3 477 aaKnown RBP eCLIP26.23■■□□□ 1.79
HLA-C-201ENST00000376228 C9orf78Q9NZ63 289 aaPredicted RBP26.23■■□□□ 1.79
HLA-C-201ENST00000376228 NEURL1BA8MQ27 555 aa26.22■■□□□ 1.79
HLA-C-201ENST00000376228 GRM8O00222 908 aa26.22■■□□□ 1.79
HLA-C-201ENST00000376228 GTF2E1P29083 439 aaPredicted RBP26.22■■□□□ 1.79
HLA-C-201ENST00000376228 POLA2Q14181 598 aa26.22■■□□□ 1.79
HLA-C-201ENST00000376228 SUSD4Q5VX71 490 aa26.22■■□□□ 1.79
HLA-C-201ENST00000376228 ARHGAP27Q6ZUM4 889 aa26.22■■□□□ 1.79
HLA-C-201ENST00000376228 ABCC12Q96J65 1359 aa26.21■■□□□ 1.79
HLA-C-201ENST00000376228 CWF19L2Q2TBE0 894 aaKnown RBP26.21■■□□□ 1.79
HLA-C-201ENST00000376228 PNMA6EA0A0J9YXQ4 647 aa26.2■■□□□ 1.79
HLA-C-201ENST00000376228 GCKRQ14397 625 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 ERFEQ4G0M1 354 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 TTLL6Q8N841 843 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 SLX4Q8IY92 1834 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 MYD88Q99836 296 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 NYXQ9GZU5 481 aa26.19■■□□□ 1.78
HLA-C-201ENST00000376228 ZNF784Q8NCA9 323 aaPredicted RBP26.18■■□□□ 1.78
HLA-C-201ENST00000376228 ZBTB47Q9UFB7 747 aaPredicted RBP26.18■■□□□ 1.78
HLA-C-201ENST00000376228 NTSR2O95665 410 aa26.17■■□□□ 1.78
HLA-C-201ENST00000376228 SRGNP10124 158 aa26.17■■□□□ 1.78
HLA-C-201ENST00000376228 PPP1R42Q7Z4L9 355 aa26.17■■□□□ 1.78
HLA-C-201ENST00000376228 ZNF219Q9P2Y4 722 aaPredicted RBP26.17■■□□□ 1.78
HLA-C-201ENST00000376228 SBF1O95248 1867 aa26.16■■□□□ 1.78
HLA-C-201ENST00000376228 TCIRG1Q13488 830 aa26.15■■□□□ 1.78
HLA-C-201ENST00000376228 PARP10Q53GL7 1025 aa26.15■■□□□ 1.78
HLA-C-201ENST00000376228 HSP90AB3PQ58FF7 597 aa26.15■■□□□ 1.78
HLA-C-201ENST00000376228 MASTLQ96GX5 879 aa26.14■■□□□ 1.78
HLA-C-201ENST00000376228 CCDC88AQ3V6T2 1871 aa26.14■■□□□ 1.78
HLA-C-201ENST00000376228 LAMB2P55268 1798 aa26.14■■□□□ 1.77
HLA-C-201ENST00000376228 RAB11FIP3O75154 756 aa26.14■■□□□ 1.77
HLA-C-201ENST00000376228 BMP2KLQ5H9B9 411 aa26.14■■□□□ 1.77
HLA-C-201ENST00000376228 NLRP10Q86W26 655 aa26.14■■□□□ 1.77
HLA-C-201ENST00000376228 STYK1Q6J9G0 422 aa26.13■■□□□ 1.77
HLA-C-201ENST00000376228 UTP14AQ9BVJ6 771 aaKnown RBP26.13■■□□□ 1.77
HLA-C-201ENST00000376228 NOP58Q9Y2X3 529 aaKnown RBP26.13■■□□□ 1.77
HLA-C-201ENST00000376228 KLRG2A4D1S0 409 aaPredicted RBP26.12■■□□□ 1.77
HLA-C-201ENST00000376228 ATP5J2-PTCD1G3V325 749 aa26.12■■□□□ 1.77
HLA-C-201ENST00000376228 SRGAP3O43295 1099 aa26.12■■□□□ 1.77
HLA-C-201ENST00000376228 PLEKHM2Q8IWE5 1019 aa26.12■■□□□ 1.77
HLA-C-201ENST00000376228 KAZALD1Q96I82 304 aa26.12■■□□□ 1.77
HLA-C-201ENST00000376228 C21orf2O43822 256 aa26.11■■□□□ 1.77
HLA-C-201ENST00000376228 RASSF7Q02833 373 aa26.11■■□□□ 1.77
HLA-C-201ENST00000376228 TRIM28Q13263 835 aaKnown RBP26.11■■□□□ 1.77
HLA-C-201ENST00000376228 HSP90AB4PQ58FF6 505 aa26.11■■□□□ 1.77
HLA-C-201ENST00000376228 PRPF40BQ6NWY9 871 aaKnown RBP26.11■■□□□ 1.77
HLA-C-201ENST00000376228 SUCLG2Q96I99 432 aa26.11■■□□□ 1.77
HLA-C-201ENST00000376228 LRRCC1Q9C099 1032 aa26.11■■□□□ 1.77
HLA-C-201ENST00000376228 NPR1P16066 1061 aa26.1■■□□□ 1.77
HLA-C-201ENST00000376228 CCDC191Q8NCU4 936 aa26.1■■□□□ 1.77
HLA-C-201ENST00000376228 CNKSR1Q969H4 720 aa26.1■■□□□ 1.77
HLA-C-201ENST00000376228 FER1L6Q2WGJ9 1857 aa26.1■■□□□ 1.77
HLA-C-201ENST00000376228 C3orf67Q6ZVT6 689 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 SYNE4Q8N205 404 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 EXOC6BQ9Y2D4 811 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 DDX60Q8IY21 1712 aaKnown RBP26.09■■□□□ 1.77
HLA-C-201ENST00000376228 H7C1W4 665 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 CASP7P55210 303 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 ISCA1Q9BUE6 129 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 OSBPL3Q9H4L5 887 aa26.09■■□□□ 1.77
HLA-C-201ENST00000376228 TRMT112Q9UI30 125 aaKnown RBP26.09■■□□□ 1.77
HLA-C-201ENST00000376228 RIC1Q4ADV7 1423 aa26.08■■□□□ 1.77
HLA-C-201ENST00000376228 CRY2Q49AN0 593 aa26.07■■□□□ 1.76
HLA-C-201ENST00000376228 C9orf131Q5VYM1 1079 aa26.07■■□□□ 1.76
HLA-C-201ENST00000376228 ZNF526Q8TF50 670 aaPredicted RBP26.07■■□□□ 1.76
HLA-C-201ENST00000376228 CWC25Q9NXE8 425 aaPredicted RBP26.07■■□□□ 1.76
HLA-C-201ENST00000376228 RABL6Q3YEC7 729 aaPredicted RBP26.06■■□□□ 1.76
HLA-C-201ENST00000376228 BICC1Q9H694 974 aaKnown RBP26.06■■□□□ 1.76
HLA-C-201ENST00000376228 SURF6O75683 361 aaKnown RBP26.05■■□□□ 1.76
HLA-C-201ENST00000376228 HCLS1P14317 486 aaPredicted RBP26.05■■□□□ 1.76
HLA-C-201ENST00000376228 SALL3Q9BXA9 1300 aa26.05■■□□□ 1.76
HLA-C-201ENST00000376228 NFKBIEO00221 500 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 SMARCA5O60264 1052 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-201ENST00000376228 RTL5Q5HYW3 569 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-201ENST00000376228 RPGRQ92834 1020 aaKnown RBP26.04■■□□□ 1.76
HLA-C-201ENST00000376228 KIF1BPQ96EK5 621 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 RNF181Q9P0P0 153 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 SH3TC1Q8TE82 1336 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 TAF1P21675 1872 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 PRELPP51888 382 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 OLFM4Q6UX06 510 aa26.04■■□□□ 1.76
HLA-C-201ENST00000376228 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
HLA-C-201ENST00000376228 TIAM2Q8IVF5 1701 aa26.03■■□□□ 1.76
HLA-C-201ENST00000376228 SLC10A5Q5PT55 438 aa26.03■■□□□ 1.76
HLA-C-201ENST00000376228 FAM89AQ96GI7 184 aa26.03■■□□□ 1.76
HLA-C-201ENST00000376228 NLRP3Q96P20 1036 aa26.03■■□□□ 1.76
HLA-C-201ENST00000376228 TTC22Q5TAA0 569 aa26.02■■□□□ 1.76
HLA-C-201ENST00000376228 UBE3BQ7Z3V4 1068 aa26.02■■□□□ 1.76
HLA-C-201ENST00000376228 APBB1O00213 710 aa26.01■■□□□ 1.75
HLA-C-201ENST00000376228 ALDH1B1P30837 517 aa26.01■■□□□ 1.75
HLA-C-201ENST00000376228 ERC1Q8IUD2 1116 aa26.01■■□□□ 1.75
HLA-C-201ENST00000376228 RHPN1Q8TCX5 695 aa26.01■■□□□ 1.75
HLA-C-201ENST00000376228 STAP2Q9UGK3 403 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms