RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 TMX4Q9H1E5 349 aaPredicted RBP27.71■■■□□ 2.03
NINJ1-201ENST00000375446 ZNF277Q9NRM2 450 aaPredicted RBP27.71■■■□□ 2.03
NINJ1-201ENST00000375446 PSMD1Q99460 953 aa27.7■■■□□ 2.02
NINJ1-201ENST00000375446 H7C1W4 665 aa27.69■■■□□ 2.02
NINJ1-201ENST00000375446 SP8Q8IXZ3 490 aa27.69■■■□□ 2.02
NINJ1-201ENST00000375446 CT47B1P0C2W7 299 aaPredicted RBP27.68■■■□□ 2.02
NINJ1-201ENST00000375446 BEND3Q5T5X7 828 aa27.68■■■□□ 2.02
NINJ1-201ENST00000375446 UBE3BQ7Z3V4 1068 aa27.68■■■□□ 2.02
NINJ1-201ENST00000375446 KDM2BQ8NHM5 1336 aa27.67■■■□□ 2.02
NINJ1-201ENST00000375446 ALDH1L2Q3SY69 923 aa27.67■■■□□ 2.02
NINJ1-201ENST00000375446 CCDC152Q4G0S7 254 aa27.67■■■□□ 2.02
NINJ1-201ENST00000375446 TMC4Q7Z404 712 aa27.67■■■□□ 2.02
NINJ1-201ENST00000375446 CELF1Q92879 486 aaKnown RBP27.67■■■□□ 2.02
NINJ1-201ENST00000375446 BCL2L13Q9BXK5 485 aa27.67■■■□□ 2.02
NINJ1-201ENST00000375446 IARSP41252 1262 aaKnown RBP27.66■■■□□ 2.02
NINJ1-201ENST00000375446 CTSWP56202 376 aa27.65■■■□□ 2.02
NINJ1-201ENST00000375446 NMRK2Q9NPI5 230 aa27.65■■■□□ 2.02
NINJ1-201ENST00000375446 SMC4Q9NTJ3 1288 aa27.65■■■□□ 2.02
NINJ1-201ENST00000375446 GLTPD2A6NH11 291 aa27.64■■■□□ 2.02
NINJ1-201ENST00000375446 CASP7P55210 303 aa27.64■■■□□ 2.02
NINJ1-201ENST00000375446 SLC4A10Q6U841 1118 aa27.64■■■□□ 2.02
NINJ1-201ENST00000375446 CCDC85AQ96PX6 553 aaPredicted RBP27.64■■■□□ 2.02
NINJ1-201ENST00000375446 SEC31BQ9NQW1 1179 aa27.64■■■□□ 2.02
NINJ1-201ENST00000375446 PTPRCP08575 1304 aa27.64■■■□□ 2.01
NINJ1-201ENST00000375446 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.01
NINJ1-201ENST00000375446 KIF3CO14782 793 aa27.63■■■□□ 2.01
NINJ1-201ENST00000375446 RPS8P62241 208 aaKnown RBP27.63■■■□□ 2.01
NINJ1-201ENST00000375446 TIAM2Q8IVF5 1701 aa27.63■■■□□ 2.01
NINJ1-201ENST00000375446 DPY19L2Q6NUT2 758 aa27.62■■■□□ 2.01
NINJ1-201ENST00000375446 DPP8Q6V1X1 898 aaPredicted RBP27.62■■■□□ 2.01
NINJ1-201ENST00000375446 MPNDQ8N594 471 aa27.62■■■□□ 2.01
NINJ1-201ENST00000375446 TTLL11Q8NHH1 800 aa27.62■■■□□ 2.01
NINJ1-201ENST00000375446 ALDH1L1O75891 902 aa27.61■■■□□ 2.01
NINJ1-201ENST00000375446 PLA2G12BQ9BX93 195 aa27.61■■■□□ 2.01
NINJ1-201ENST00000375446 RTFDC1Q9BY42 306 aaPredicted RBP27.61■■■□□ 2.01
NINJ1-201ENST00000375446 SRCIN1Q9C0H9 1055 aa27.61■■■□□ 2.01
NINJ1-201ENST00000375446 SUPT20HQ8NEM7 779 aa27.6■■■□□ 2.01
NINJ1-201ENST00000375446 COL4A1P02462 1669 aa27.59■■■□□ 2.01
NINJ1-201ENST00000375446 DICER1Q9UPY3 1922 aaKnown RBP27.59■■■□□ 2.01
NINJ1-201ENST00000375446 RRAGCQ9HB90 399 aa27.59■■■□□ 2.01
NINJ1-201ENST00000375446 TAF1P21675 1872 aa27.59■■■□□ 2.01
NINJ1-201ENST00000375446 GRM8O00222 908 aa27.58■■■□□ 2.01
NINJ1-201ENST00000375446 C1QTNF8P60827 252 aa27.58■■■□□ 2.01
NINJ1-201ENST00000375446 LARGE2Q8N3Y3 721 aa27.58■■■□□ 2.01
NINJ1-201ENST00000375446 JDP2Q8WYK2 163 aa27.58■■■□□ 2.01
NINJ1-201ENST00000375446 GREM2Q9H772 168 aa27.58■■■□□ 2.01
NINJ1-201ENST00000375446 RARSP54136 660 aaKnown RBP27.57■■■□□ 2
NINJ1-201ENST00000375446 VPS33BQ9H267 617 aa27.57■■■□□ 2
NINJ1-201ENST00000375446 RTL9Q8NET4 1388 aa27.57■■■□□ 2
NINJ1-201ENST00000375446 PPIP5K2O43314 1243 aa27.56■■■□□ 2
NINJ1-201ENST00000375446 ANKRD18AQ8IVF6 992 aa27.56■■■□□ 2
NINJ1-201ENST00000375446 CDC5LQ99459 802 aaKnown RBP27.56■■■□□ 2
NINJ1-201ENST00000375446 C9orf78Q9NZ63 289 aaPredicted RBP27.56■■■□□ 2
NINJ1-201ENST00000375446 NSFL1CQ9UNZ2 370 aaKnown RBP27.56■■■□□ 2
NINJ1-201ENST00000375446 ZBED9Q6R2W3 1325 aa27.56■■■□□ 2
NINJ1-201ENST00000375446 FZD9O00144 591 aa27.55■■■□□ 2
NINJ1-201ENST00000375446 DDNO94850 711 aaPredicted RBP27.55■■■□□ 2
NINJ1-201ENST00000375446 BRPF1P55201 1214 aaPredicted RBP27.55■■■□□ 2
NINJ1-201ENST00000375446 AOC3Q16853 763 aa27.55■■■□□ 2
NINJ1-201ENST00000375446 LRRC37AA6NMS7 1700 aa27.54■■■□□ 2
NINJ1-201ENST00000375446 CSF1RP07333 972 aa27.54■■■□□ 2
NINJ1-201ENST00000375446 GPSM2P81274 684 aa27.54■■■□□ 2
NINJ1-201ENST00000375446 ZNF541Q9H0D2 1346 aa27.54■■■□□ 2
NINJ1-201ENST00000375446 NOB1Q9ULX3 412 aaKnown RBP27.53■■■□□ 2
NINJ1-201ENST00000375446 COL4A5P29400 1685 aa27.52■■■□□ 2
NINJ1-201ENST00000375446 VEGFAP15692 232 aaPredicted RBP27.52■■■□□ 2
NINJ1-201ENST00000375446 FOXO4P98177 505 aa27.52■■■□□ 2
NINJ1-201ENST00000375446 FAM161AQ3B820 660 aa27.52■■■□□ 2
NINJ1-201ENST00000375446 NIM1KQ8IY84 436 aa27.52■■■□□ 2
NINJ1-201ENST00000375446 TOMM70O94826 608 aa27.51■■□□□ 1.99
NINJ1-201ENST00000375446 ITGA6P23229 1130 aa27.51■■□□□ 1.99
NINJ1-201ENST00000375446 KIAA2012Q0VF49 1180 aa27.51■■□□□ 1.99
NINJ1-201ENST00000375446 C16orf71Q8IYS4 520 aaPredicted RBP27.51■■□□□ 1.99
NINJ1-201ENST00000375446 EIF6P56537 245 aaKnown RBP27.5■■□□□ 1.99
NINJ1-201ENST00000375446 PODXL2Q9NZ53 605 aa27.5■■□□□ 1.99
NINJ1-201ENST00000375446 POLLQ9UGP5 575 aa27.5■■□□□ 1.99
NINJ1-201ENST00000375446 DUOX1Q9NRD9 1551 aa27.5■■□□□ 1.99
NINJ1-201ENST00000375446 POTECB2RU33 542 aa27.49■■□□□ 1.99
NINJ1-201ENST00000375446 C6orf229H3BNL8 230 aa27.49■■□□□ 1.99
NINJ1-201ENST00000375446 EPHA10Q5JZY3 1008 aa27.49■■□□□ 1.99
NINJ1-201ENST00000375446 API5Q9BZZ5 524 aaKnown RBP27.49■■□□□ 1.99
NINJ1-201ENST00000375446 BSDC1Q9NW68 430 aaPredicted RBP27.49■■□□□ 1.99
NINJ1-201ENST00000375446 ANKIB1Q9P2G1 1089 aa27.49■■□□□ 1.99
NINJ1-201ENST00000375446 UTYO14607 1347 aa27.48■■□□□ 1.99
NINJ1-201ENST00000375446 MYH3P11055 1940 aa27.48■■□□□ 1.99
NINJ1-201ENST00000375446 NBPF7P0C2Y1 421 aaPredicted RBP27.48■■□□□ 1.99
NINJ1-201ENST00000375446 IGHMBP2P38935 993 aaKnown RBP27.48■■□□□ 1.99
NINJ1-201ENST00000375446 TBC1D16Q8TBP0 767 aa27.48■■□□□ 1.99
NINJ1-201ENST00000375446 WDR90Q96KV7 1748 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 KIF16BQ96L93 1317 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 WASHC4Q2M389 1173 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 LMBR1LQ6UX01 489 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 L3MBTL3Q96JM7 780 aaPredicted RBP27.47■■□□□ 1.99
NINJ1-201ENST00000375446 ZNRF3Q9ULT6 936 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 CHMP3Q9Y3E7 222 aa27.47■■□□□ 1.99
NINJ1-201ENST00000375446 ANKRD18BA2A2Z9 1011 aa27.46■■□□□ 1.99
NINJ1-201ENST00000375446 GPC2Q8N158 579 aa27.46■■□□□ 1.99
NINJ1-201ENST00000375446 SUCLG2Q96I99 432 aa27.46■■□□□ 1.99
NINJ1-201ENST00000375446 EYA3Q99504 573 aa27.46■■□□□ 1.99
NINJ1-201ENST00000375446 GGA1Q9UJY5 639 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms