RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
PFDN6-201ENST00000374606 C2CD5Q86YS7 1000 aa21.94■■□□□ 1.1
PFDN6-201ENST00000374606 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
PFDN6-201ENST00000374606 BCL2L12Q9HB09 334 aa21.94■■□□□ 1.1
PFDN6-201ENST00000374606 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
PFDN6-201ENST00000374606 UTYO14607 1347 aa21.94■■□□□ 1.1
PFDN6-201ENST00000374606 GNAI2P04899 355 aa21.93■■□□□ 1.1
PFDN6-201ENST00000374606 NBPF7P0C2Y1 421 aaPredicted RBP21.93■■□□□ 1.1
PFDN6-201ENST00000374606 PARP10Q53GL7 1025 aa21.93■■□□□ 1.1
PFDN6-201ENST00000374606 UBN2Q6ZU65 1347 aa21.93■■□□□ 1.1
PFDN6-201ENST00000374606 HDAC5Q9UQL6 1122 aa21.93■■□□□ 1.1
PFDN6-201ENST00000374606 H0YIN7 160 aa21.92■■□□□ 1.1
PFDN6-201ENST00000374606 NFKBIEO00221 500 aa21.92■■□□□ 1.1
PFDN6-201ENST00000374606 CARMIL3Q8ND23 1372 aa21.91■■□□□ 1.1
PFDN6-201ENST00000374606 TBC1D9BQ66K14 1250 aa21.91■■□□□ 1.1
PFDN6-201ENST00000374606 UBE3BQ7Z3V4 1068 aa21.91■■□□□ 1.1
PFDN6-201ENST00000374606 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
PFDN6-201ENST00000374606 DPY19L2Q6NUT2 758 aa21.9■■□□□ 1.1
PFDN6-201ENST00000374606 BICDL1Q6ZP65 573 aa21.9■■□□□ 1.1
PFDN6-201ENST00000374606 LRRFIP2Q9Y608 721 aaKnown RBP21.9■■□□□ 1.1
PFDN6-201ENST00000374606 LAMB2P55268 1798 aa21.89■■□□□ 1.1
PFDN6-201ENST00000374606 H7C1W4 665 aa21.89■■□□□ 1.09
PFDN6-201ENST00000374606 PCCAP05165 728 aaPredicted RBP21.89■■□□□ 1.09
PFDN6-201ENST00000374606 PCDHB15Q9Y5E8 787 aa21.89■■□□□ 1.09
PFDN6-201ENST00000374606 PPP1R42Q7Z4L9 355 aa21.88■■□□□ 1.09
PFDN6-201ENST00000374606 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
PFDN6-201ENST00000374606 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
PFDN6-201ENST00000374606 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
PFDN6-201ENST00000374606 UTP14AQ9BVJ6 771 aaKnown RBP21.88■■□□□ 1.09
PFDN6-201ENST00000374606 TRMT112Q9UI30 125 aaKnown RBP21.88■■□□□ 1.09
PFDN6-201ENST00000374606 POTECB2RU33 542 aa21.87■■□□□ 1.09
PFDN6-201ENST00000374606 CASP7P55210 303 aa21.87■■□□□ 1.09
PFDN6-201ENST00000374606 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
PFDN6-201ENST00000374606 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
PFDN6-201ENST00000374606 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
PFDN6-201ENST00000374606 JARID2Q92833 1246 aaPredicted RBP21.87■■□□□ 1.09
PFDN6-201ENST00000374606 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
PFDN6-201ENST00000374606 DICER1Q9UPY3 1922 aaKnown RBP21.86■■□□□ 1.09
PFDN6-201ENST00000374606 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
PFDN6-201ENST00000374606 CDHR2Q9BYE9 1310 aa21.86■■□□□ 1.09
PFDN6-201ENST00000374606 FAM177BA6PVY3 158 aa21.86■■□□□ 1.09
PFDN6-201ENST00000374606 CEP85Q6P2H3 762 aa21.86■■□□□ 1.09
PFDN6-201ENST00000374606 ANKRD31Q8N7Z5 1873 aa21.86■■□□□ 1.09
PFDN6-201ENST00000374606 NTSR2O95665 410 aa21.85■■□□□ 1.09
PFDN6-201ENST00000374606 ERFEQ4G0M1 354 aa21.85■■□□□ 1.09
PFDN6-201ENST00000374606 RPAP2Q8IXW5 612 aaPredicted RBP21.85■■□□□ 1.09
PFDN6-201ENST00000374606 ZNF622Q969S3 477 aaKnown RBP eCLIP21.85■■□□□ 1.093e-9■□□□□ 10.4
PFDN6-201ENST00000374606 FAM89AQ96GI7 184 aa21.85■■□□□ 1.09
PFDN6-201ENST00000374606 NYXQ9GZU5 481 aa21.85■■□□□ 1.09
PFDN6-201ENST00000374606 DDX60Q8IY21 1712 aaKnown RBP21.85■■□□□ 1.09
PFDN6-201ENST00000374606 MYH3P11055 1940 aa21.84■■□□□ 1.09
PFDN6-201ENST00000374606 FER1L6Q2WGJ9 1857 aa21.84■■□□□ 1.09
PFDN6-201ENST00000374606 ANKRD44Q8N8A2 993 aa21.84■■□□□ 1.09
PFDN6-201ENST00000374606 BICC1Q9H694 974 aaKnown RBP21.84■■□□□ 1.09
PFDN6-201ENST00000374606 COL11A2P13942 1736 aaPredicted RBP21.83■■□□□ 1.09
PFDN6-201ENST00000374606 C21orf2O43822 256 aa21.83■■□□□ 1.09
PFDN6-201ENST00000374606 PDE6BP35913 854 aa21.83■■□□□ 1.09
PFDN6-201ENST00000374606 NBPF5PQ86XG9 351 aaPredicted RBP21.83■■□□□ 1.09
PFDN6-201ENST00000374606 RWDD1Q9H446 243 aaPredicted RBP21.83■■□□□ 1.09
PFDN6-201ENST00000374606 CREBZFQ9NS37 354 aa21.83■■□□□ 1.09
PFDN6-201ENST00000374606 HMMRO75330 724 aa21.82■■□□□ 1.08
PFDN6-201ENST00000374606 HDAC1Q13547 482 aaPredicted RBP21.82■■□□□ 1.08
PFDN6-201ENST00000374606 CHADLQ6NUI6 762 aa21.82■■□□□ 1.08
PFDN6-201ENST00000374606 KAZALD1Q96I82 304 aa21.82■■□□□ 1.08
PFDN6-201ENST00000374606 BRIP1Q9BX63 1249 aa21.82■■□□□ 1.08
PFDN6-201ENST00000374606 ZNF219Q9P2Y4 722 aaPredicted RBP21.82■■□□□ 1.08
PFDN6-201ENST00000374606 LTBP3Q9NS15 1303 aa21.81■■□□□ 1.08
PFDN6-201ENST00000374606 IRS4O14654 1257 aaPredicted RBP21.81■■□□□ 1.08
PFDN6-201ENST00000374606 HSP90B1P14625 803 aaKnown RBP21.81■■□□□ 1.08
PFDN6-201ENST00000374606 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
PFDN6-201ENST00000374606 MTX1Q13505 466 aa21.81■■□□□ 1.08
PFDN6-201ENST00000374606 PLA2G12BQ9BX93 195 aa21.81■■□□□ 1.08
PFDN6-201ENST00000374606 TAOK3Q9H2K8 898 aa21.81■■□□□ 1.08
PFDN6-201ENST00000374606 NPHP1O15259 732 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 ATP8B2P98198 1209 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 EPHA10Q5JZY3 1008 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 PRR5LQ6MZQ0 368 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 NUTM1Q86Y26 1132 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
PFDN6-201ENST00000374606 MKRN1Q9UHC7 482 aaKnown RBP21.8■■□□□ 1.08
PFDN6-201ENST00000374606 SRGAP3O43295 1099 aa21.79■■□□□ 1.08
PFDN6-201ENST00000374606 RABL6Q3YEC7 729 aaPredicted RBP21.79■■□□□ 1.08
PFDN6-201ENST00000374606 TPTE2Q6XPS3 522 aa21.79■■□□□ 1.08
PFDN6-201ENST00000374606 SYNE4Q8N205 404 aa21.79■■□□□ 1.08
PFDN6-201ENST00000374606 CNBD1Q8NA66 436 aa21.79■■□□□ 1.08
PFDN6-201ENST00000374606 ABCC12Q96J65 1359 aa21.78■■□□□ 1.08
PFDN6-201ENST00000374606 PNMA6EA0A0J9YXQ4 647 aa21.78■■□□□ 1.08
PFDN6-201ENST00000374606 PDE8AO60658 829 aa21.78■■□□□ 1.08
PFDN6-201ENST00000374606 FOXO4P98177 505 aa21.78■■□□□ 1.08
PFDN6-201ENST00000374606 CENPQQ7L2Z9 268 aaPredicted RBP21.78■■□□□ 1.08
PFDN6-201ENST00000374606 IGHDP01880 384 aa21.77■■□□□ 1.08
PFDN6-201ENST00000374606 CCDC24Q8N4L8 307 aa21.77■■□□□ 1.08
PFDN6-201ENST00000374606 DDNO94850 711 aaPredicted RBP21.76■■□□□ 1.07
PFDN6-201ENST00000374606 HCLS1P14317 486 aaPredicted RBP21.76■■□□□ 1.07
PFDN6-201ENST00000374606 CTSWP56202 376 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 POLA2Q14181 598 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 RIC1Q4ADV7 1423 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 SOGA3Q5TF21 947 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 LMBR1LQ6UX01 489 aa21.76■■□□□ 1.07
PFDN6-201ENST00000374606 SSH3Q8TE77 659 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms