RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-202ENST00000373474 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 UBE3BQ7Z3V4 1068 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-202ENST00000373474 ABCC1P33527 1531 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 CFAP57Q96MR6 1250 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 TAOK3Q9H2K8 898 aa16.31■□□□□ 0.2
LMX1B-202ENST00000373474 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
LMX1B-202ENST00000373474 HAND2P61296 217 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 ZNF830Q96NB3 372 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-202ENST00000373474 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 BRF1Q92994 677 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 TEX13AQ9BXU3 409 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-202ENST00000373474 PZPP20742 1482 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 VAMP4O75379 141 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 HS1BP3Q53T59 392 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 VPS36Q86VN1 386 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 KCNG4Q8TDN1 519 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 FEZ1Q99689 392 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
LMX1B-202ENST00000373474 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
LMX1B-202ENST00000373474 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 KIF20AO95235 890 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
LMX1B-202ENST00000373474 MCMDC2Q4G0Z9 681 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 PLEKHM2Q8IWE5 1019 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 ALS2CR12Q96Q35 445 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 SEC24BO95487 1268 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 SYKP43405 635 aa16.29■□□□□ 0.2
LMX1B-202ENST00000373474 AMPD3Q01432 767 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC178Q5BJE1 867 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 Q6ZUG5 572 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 MICU3Q86XE3 530 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 POLKQ9UBT6 870 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 KLF18A0A0U1RQI7 1052 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 FOXO3O43524 673 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
LMX1B-202ENST00000373474 DNM1Q05193 864 aaKnown RBP16.28■□□□□ 0.2
LMX1B-202ENST00000373474 KIF5BP33176 963 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 MTIF2P46199 727 aaKnown RBP16.28■□□□□ 0.2
LMX1B-202ENST00000373474 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
LMX1B-202ENST00000373474 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 DAAM2Q86T65 1068 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
LMX1B-202ENST00000373474 KDM2BQ8NHM5 1336 aa16.28■□□□□ 0.2
LMX1B-202ENST00000373474 ZPR1O75312 459 aa16.27■□□□□ 0.2
LMX1B-202ENST00000373474 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
LMX1B-202ENST00000373474 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-202ENST00000373474 INTS4Q96HW7 963 aaKnown RBP16.27■□□□□ 0.2
LMX1B-202ENST00000373474 USP26Q9BXU7 913 aa16.27■□□□□ 0.2
LMX1B-202ENST00000373474 BCCIPQ9P287 314 aaKnown RBP eCLIP16.27■□□□□ 0.2
LMX1B-202ENST00000373474 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.2
LMX1B-202ENST00000373474 NMIQ13287 307 aaPredicted RBP16.27■□□□□ 0.2
LMX1B-202ENST00000373474 CEP112Q8N8E3 955 aa16.27■□□□□ 0.2
LMX1B-202ENST00000373474 ANXA1P04083 346 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 MATR3P43243 847 aaKnown RBP eCLIP16.27■□□□□ 0.19
LMX1B-202ENST00000373474 UBASH3AP57075 661 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 TNIP1Q15025 636 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 SPECC1Q5M775 1068 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 RAB11FIP4Q86YS3 637 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 CALML4Q96GE6 196 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
LMX1B-202ENST00000373474 PER1O15534 1290 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-202ENST00000373474 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 GRM8O00222 908 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 KSR2Q6VAB6 950 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 TNRQ92752 1358 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 GPTP24298 496 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 CCDC186Q7Z3E2 898 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 SKILP12757 684 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
LMX1B-202ENST00000373474 TDRD12Q587J7 1177 aaKnown RBP16.26■□□□□ 0.19
LMX1B-202ENST00000373474 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 AKAP4Q5JQC9 854 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 KRT23Q9C075 422 aa16.26■□□□□ 0.19
LMX1B-202ENST00000373474 AK2P54819 239 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 GNG11P61952 73 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 NSRP1Q9H0G5 558 aaKnown RBP16.25■□□□□ 0.19
LMX1B-202ENST00000373474 INSRP06213 1382 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
LMX1B-202ENST00000373474 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
LMX1B-202ENST00000373474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms