RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 PLA2G4DQ86XP0 818 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 CCDC112Q8NEF3 446 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 ANKRD24Q8TF21 1146 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 SLC27A2O14975 620 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 AXIN2Q9Y2T1 843 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
COL9A2-202ENST00000372748 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
COL9A2-202ENST00000372748 PDCP20941 246 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
COL9A2-202ENST00000372748 PGBD1Q96JS3 809 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 FEZ1Q99689 392 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.394e-7■■□□□ 14
COL9A2-202ENST00000372748 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
COL9A2-202ENST00000372748 NPHP3Q7Z494 1330 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 USP42Q9H9J4 1324 aaKnown RBP17.49■□□□□ 0.39
COL9A2-202ENST00000372748 CEBPZQ03701 1054 aaKnown RBP17.49■□□□□ 0.39
COL9A2-202ENST00000372748 BLOC1S2Q6QNY1 142 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 KCNB2Q92953 911 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 EVI5LQ96CN4 794 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 CCDC8Q9H0W5 538 aaPredicted RBP17.49■□□□□ 0.39
COL9A2-202ENST00000372748 CLSTN2Q9H4D0 955 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 OGFRQ9NZT2 677 aa17.49■□□□□ 0.39
COL9A2-202ENST00000372748 USP27XA6NNY8 438 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 SIL1Q9H173 461 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 DDX19AQ9NUU7 478 aaKnown RBP17.48■□□□□ 0.39
COL9A2-202ENST00000372748 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
COL9A2-202ENST00000372748 A0A0D9SFI3 127 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 JAK2O60674 1132 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 SLC39A6Q13433 755 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 GPATCH3Q96I76 525 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
COL9A2-202ENST00000372748 A0A087WWV3 80 aa17.47■□□□□ 0.39
COL9A2-202ENST00000372748 TDRD7Q8NHU6 1098 aaKnown RBP17.47■□□□□ 0.39
COL9A2-202ENST00000372748 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
COL9A2-202ENST00000372748 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
COL9A2-202ENST00000372748 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
COL9A2-202ENST00000372748 PSMA5P28066 241 aa17.46■□□□□ 0.39
COL9A2-202ENST00000372748 TOB2Q14106 344 aaPredicted RBP17.46■□□□□ 0.39
COL9A2-202ENST00000372748 CHMP4AQ9BY43 222 aa17.46■□□□□ 0.39
COL9A2-202ENST00000372748 BOLA2Q9H3K6 86 aa17.46■□□□□ 0.39
COL9A2-202ENST00000372748 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
COL9A2-202ENST00000372748 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
COL9A2-202ENST00000372748 MYL6BP14649 208 aa17.46■□□□□ 0.39
COL9A2-202ENST00000372748 CEP135Q66GS9 1140 aa17.46■□□□□ 0.39
COL9A2-202ENST00000372748 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.38
COL9A2-202ENST00000372748 MTX1Q13505 466 aa17.46■□□□□ 0.38
COL9A2-202ENST00000372748 KAZALD1Q96I82 304 aa17.46■□□□□ 0.38
COL9A2-202ENST00000372748 ALDH1L1O75891 902 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 FOSBP53539 338 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
COL9A2-202ENST00000372748 FSD1Q9BTV5 496 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 PAXBP1Q9Y5B6 917 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 SASH1O94885 1247 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
COL9A2-202ENST00000372748 RBM43Q6ZSC3 357 aaKnown RBP17.45■□□□□ 0.38
COL9A2-202ENST00000372748 GRM8O00222 908 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 C11orf57Q6ZUT1 292 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 FILIP1Q7Z7B0 1213 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 TRMT1Q9NXH9 659 aaKnown RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 ADAMTSL3P82987 1691 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 KDM4FA0A1W2PPD8 638 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 LRRC8AQ8IWT6 810 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 FBXW7Q969H0 707 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
COL9A2-202ENST00000372748 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
COL9A2-202ENST00000372748 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
COL9A2-202ENST00000372748 GOLGA6L19H0YKK7 550 aa17.43■□□□□ 0.38
COL9A2-202ENST00000372748 G3BP1Q13283 466 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL9A2-202ENST00000372748 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
COL9A2-202ENST00000372748 BRF1Q92994 677 aa17.43■□□□□ 0.38
COL9A2-202ENST00000372748 ZNF215Q9UL58 517 aaPredicted RBP17.43■□□□□ 0.38
COL9A2-202ENST00000372748 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL9A2-202ENST00000372748 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 RNF20Q5VTR2 975 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 LMO7Q8WWI1 1683 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 NPHP1O15259 732 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 PPFIA3O75145 1194 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 SYCP1Q15431 976 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 KIF18AQ8NI77 898 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 ERCC4Q92889 916 aaPredicted RBP17.42■□□□□ 0.38
COL9A2-202ENST00000372748 ADGRL3Q9HAR2 1447 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 H3BQV1 296 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 SKILP12757 684 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 PDIA6Q15084 440 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
COL9A2-202ENST00000372748 LRRC2Q9BYS8 371 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms