RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 PWP2Q15269 919 aaKnown RBP11.82□□□□□ -0.52
KDM4A-201ENST00000372396 JAKMIP1Q96N16 626 aaKnown RBP11.82□□□□□ -0.52
KDM4A-201ENST00000372396 PDRG1Q9NUG6 133 aa11.82□□□□□ -0.52
KDM4A-201ENST00000372396 ERICH2A1L162 156 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 ZPR1O75312 459 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 MCTP1Q6DN14 999 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 ESYT1Q9BSJ8 1104 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
KDM4A-201ENST00000372396 TDO2P48775 406 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 USP44Q9H0E7 712 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 DCCP43146 1447 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 ANAPC15P60006 121 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 SNX21Q969T3 373 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 BICC1Q9H694 974 aaKnown RBP11.81□□□□□ -0.52
KDM4A-201ENST00000372396 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
KDM4A-201ENST00000372396 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 AKAP17AQ02040 695 aaKnown RBP11.8□□□□□ -0.52
KDM4A-201ENST00000372396 ADGRB2O60241 1585 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 SSH3Q8TE77 659 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 WDR33Q9C0J8 1336 aaKnown RBP11.8□□□□□ -0.52
KDM4A-201ENST00000372396 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
KDM4A-201ENST00000372396 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 TMX1Q9H3N1 280 aa11.8□□□□□ -0.52
KDM4A-201ENST00000372396 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
KDM4A-201ENST00000372396 CRB1P82279 1406 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
KDM4A-201ENST00000372396 SLC5A1P13866 664 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 TRIM29Q14134 588 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 GCKRQ14397 625 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 JARID2Q92833 1246 aaPredicted RBP11.79□□□□□ -0.52
KDM4A-201ENST00000372396 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 U3KPZ7 1027 aaPredicted RBP11.79□□□□□ -0.52
KDM4A-201ENST00000372396 GOLIM4O00461 696 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 DHX16O60231 1041 aaKnown RBP11.79□□□□□ -0.52
KDM4A-201ENST00000372396 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
KDM4A-201ENST00000372396 BCL2L12Q9HB09 334 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 AXIN2Q9Y2T1 843 aa11.79□□□□□ -0.52
KDM4A-201ENST00000372396 MBD3O95983 291 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 CASTP20810 708 aaKnown RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 SART3Q15020 963 aaKnown RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 DZIP3Q86Y13 1208 aaKnown RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 SEC24BO95487 1268 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 GTF2F1P35269 517 aaKnown RBP eCLIP11.78□□□□□ -0.523e-11■■■■□ 24.9
KDM4A-201ENST00000372396 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 FOXD4L6Q3SYB3 417 aaPredicted RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 FOXD4L3Q6VB84 417 aaPredicted RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 MPNDQ8N594 471 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 ACSBG1Q96GR2 724 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 KLHL40Q2TBA0 621 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 BICDL1Q6ZP65 573 aa11.78□□□□□ -0.52
KDM4A-201ENST00000372396 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
KDM4A-201ENST00000372396 MAP2P11137 1827 aaKnown RBP11.77□□□□□ -0.52
KDM4A-201ENST00000372396 NEURL1BA8MQ27 555 aa11.77□□□□□ -0.52
KDM4A-201ENST00000372396 SUCLG2Q96I99 432 aa11.77□□□□□ -0.52
KDM4A-201ENST00000372396 HMG20BQ9P0W2 317 aa11.77□□□□□ -0.53
KDM4A-201ENST00000372396 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
KDM4A-201ENST00000372396 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
KDM4A-201ENST00000372396 NRDCO43847 1150 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 USP16Q9Y5T5 823 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 A1BGP04217 495 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 CHMLP26374 656 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 SSR1P43307 286 aaKnown RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 RAD50Q92878 1312 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 IDH1O75874 414 aaKnown RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
KDM4A-201ENST00000372396 UQCRFS1P1P0C7P4 283 aa11.76□□□□□ -0.53
KDM4A-201ENST00000372396 SLC3A2P08195 630 aaKnown RBP11.75□□□□□ -0.53
KDM4A-201ENST00000372396 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 DRC7Q8IY82 874 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 UTP14AQ9BVJ6 771 aaKnown RBP11.75□□□□□ -0.53
KDM4A-201ENST00000372396 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
KDM4A-201ENST00000372396 LIMCH1Q9UPQ0 1083 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 USP26Q9BXU7 913 aa11.75□□□□□ -0.53
KDM4A-201ENST00000372396 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 EPB41L2O43491 1005 aaKnown RBP11.74□□□□□ -0.53
KDM4A-201ENST00000372396 C10orf67Q8IYJ2 551 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 AK7Q96M32 723 aa11.74□□□□□ -0.53
KDM4A-201ENST00000372396 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
KDM4A-201ENST00000372396 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms