RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 PAPPAQ13219 1627 aa15.84■□□□□ 0.13
ECM1-202ENST00000369047 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
ECM1-202ENST00000369047 ZKSCAN1P17029 563 aaPredicted RBP15.83■□□□□ 0.12
ECM1-202ENST00000369047 ATP5JP18859 108 aa15.83■□□□□ 0.12
ECM1-202ENST00000369047 NBPF14Q5TI25 921 aa15.83■□□□□ 0.12
ECM1-202ENST00000369047 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
ECM1-202ENST00000369047 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
ECM1-202ENST00000369047 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
ECM1-202ENST00000369047 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 CCDC171Q6TFL3 1326 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 NECTIN1Q15223 517 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 PIGBQ92521 554 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 ATP5J2-PTCD1G3V325 749 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 PTCD1O75127 700 aaKnown RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 TNNI3KQ59H18 835 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 VPS53Q5VIR6 699 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 CCDC191Q8NCU4 936 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 CWC25Q9NXE8 425 aaPredicted RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.82■□□□□ 0.12
ECM1-202ENST00000369047 FPGT-TNNI3KV9GXZ4 949 aa15.82■□□□□ 0.12
ECM1-202ENST00000369047 PTH1RQ03431 593 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 SLC27A3Q5K4L6 730 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 KLHDC4Q8TBB5 520 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.81■□□□□ 0.12
ECM1-202ENST00000369047 RREB1Q92766 1687 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 PALLDQ8WX93 1383 aa15.81■□□□□ 0.12
ECM1-202ENST00000369047 LY75O60449 1722 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
ECM1-202ENST00000369047 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 BOLA2Q9H3K6 86 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 ATG3Q9NT62 314 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 CYP46A1Q9Y6A2 500 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 PSMA5P28066 241 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 AK2P54819 239 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
ECM1-202ENST00000369047 NMIQ13287 307 aaPredicted RBP15.8■□□□□ 0.12
ECM1-202ENST00000369047 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 CAMKK2Q96RR4 588 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 GPR108Q9NPR9 543 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 TLR7Q9NYK1 1049 aaKnown RBP15.8■□□□□ 0.12
ECM1-202ENST00000369047 NUP188Q5SRE5 1749 aa15.8■□□□□ 0.12
ECM1-202ENST00000369047 PRPF40AO75400 957 aaKnown RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 FOXO4P98177 505 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 TFCP2Q12800 502 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 FAM43AQ8N2R8 423 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 PDIA4P13667 645 aaKnown RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 ZNF445P59923 1031 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 LMBR1LQ6UX01 489 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
ECM1-202ENST00000369047 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
ECM1-202ENST00000369047 ZNF831Q5JPB2 1677 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 MBD3O95983 291 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 A1BGP04217 495 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 KCNJ4P48050 445 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 TTLL7Q6ZT98 887 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 PDRG1Q9NUG6 133 aa15.78■□□□□ 0.12
ECM1-202ENST00000369047 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
ECM1-202ENST00000369047 RBM8AQ9Y5S9 174 aaKnown RBP15.78■□□□□ 0.12
ECM1-202ENST00000369047 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
ECM1-202ENST00000369047 TXNRD1Q16881 649 aa15.77■□□□□ 0.12
ECM1-202ENST00000369047 CREB3L3Q68CJ9 461 aa15.77■□□□□ 0.12
ECM1-202ENST00000369047 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.12
ECM1-202ENST00000369047 FAM227BQ96M60 508 aa15.77■□□□□ 0.12
ECM1-202ENST00000369047 JAKMIP1Q96N16 626 aaKnown RBP15.77■□□□□ 0.12
ECM1-202ENST00000369047 ALDH8A1Q9H2A2 487 aaPredicted RBP15.77■□□□□ 0.12
ECM1-202ENST00000369047 HMG20BQ9P0W2 317 aa15.77■□□□□ 0.12
ECM1-202ENST00000369047 TSGA10IPQ3SY00 556 aa15.77■□□□□ 0.11
ECM1-202ENST00000369047 GAS2L3Q86XJ1 694 aa15.77■□□□□ 0.11
ECM1-202ENST00000369047 MED23Q9ULK4 1368 aa15.77■□□□□ 0.11
ECM1-202ENST00000369047 IL15P40933 162 aaPredicted RBP15.76■□□□□ 0.11
ECM1-202ENST00000369047 TRIM28Q13263 835 aaKnown RBP15.76■□□□□ 0.11
ECM1-202ENST00000369047 HAUS7Q99871 368 aa15.76■□□□□ 0.11
ECM1-202ENST00000369047 CCNL1Q9UK58 526 aaPredicted RBP15.76■□□□□ 0.11
ECM1-202ENST00000369047 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
ECM1-202ENST00000369047 ANKRD1Q15327 319 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 CICQ96RK0 1608 aaPredicted RBP15.75■□□□□ 0.11
ECM1-202ENST00000369047 A0A0D9SFI3 127 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 SLC27A2O14975 620 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 CIAO1O76071 339 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 ARXQ96QS3 562 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 ASAP1Q9ULH1 1129 aa15.75■□□□□ 0.11
ECM1-202ENST00000369047 TCIRG1Q13488 830 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 KRT32Q14532 448 aa15.74■□□□□ 0.11
ECM1-202ENST00000369047 ADCK5Q3MIX3 580 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms