RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 JARID2Q92833 1246 aaPredicted RBP24.27■■□□□ 1.48
CKS1B-203ENST00000368439 NEURL1BA8MQ27 555 aa24.26■■□□□ 1.47
CKS1B-203ENST00000368439 CWF19L2Q2TBE0 894 aaKnown RBP24.26■■□□□ 1.47
CKS1B-203ENST00000368439 CELF1Q92879 486 aaKnown RBP24.26■■□□□ 1.47
CKS1B-203ENST00000368439 CDHR2Q9BYE9 1310 aa24.26■■□□□ 1.47
CKS1B-203ENST00000368439 MYH3P11055 1940 aa24.25■■□□□ 1.47
CKS1B-203ENST00000368439 DDNO94850 711 aaPredicted RBP24.25■■□□□ 1.47
CKS1B-203ENST00000368439 NEXNQ0ZGT2 675 aa24.25■■□□□ 1.47
CKS1B-203ENST00000368439 FKBP5Q13451 457 aaPredicted RBP24.25■■□□□ 1.47
CKS1B-203ENST00000368439 RTFDC1Q9BY42 306 aaPredicted RBP24.25■■□□□ 1.47
CKS1B-203ENST00000368439 DUOX1Q9NRD9 1551 aa24.25■■□□□ 1.47
CKS1B-203ENST00000368439 E9PSI1 815 aa24.24■■□□□ 1.47
CKS1B-203ENST00000368439 FZD9O00144 591 aa24.24■■□□□ 1.47
CKS1B-203ENST00000368439 SLFN5Q08AF3 891 aa24.24■■□□□ 1.47
CKS1B-203ENST00000368439 RBM46Q8TBY0 533 aaKnown RBP24.24■■□□□ 1.47
CKS1B-203ENST00000368439 DNAAF4Q8WXU2 420 aa24.24■■□□□ 1.47
CKS1B-203ENST00000368439 ZNF541Q9H0D2 1346 aa24.24■■□□□ 1.47
CKS1B-203ENST00000368439 PDE8AO60658 829 aa24.23■■□□□ 1.47
CKS1B-203ENST00000368439 VEGFAP15692 232 aaPredicted RBP24.23■■□□□ 1.47
CKS1B-203ENST00000368439 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
CKS1B-203ENST00000368439 TMC4Q7Z404 712 aa24.23■■□□□ 1.47
CKS1B-203ENST00000368439 LTBP1Q14766 1721 aa24.23■■□□□ 1.47
CKS1B-203ENST00000368439 H7C1W4 665 aa24.22■■□□□ 1.47
CKS1B-203ENST00000368439 HSP90B1P14625 803 aaKnown RBP24.22■■□□□ 1.47
CKS1B-203ENST00000368439 CDCA7LQ96GN5 454 aa24.22■■□□□ 1.47
CKS1B-203ENST00000368439 SCN4AP35499 1836 aa24.21■■□□□ 1.47
CKS1B-203ENST00000368439 TRMT2AQ8IZ69 625 aaKnown RBP24.21■■□□□ 1.47
CKS1B-203ENST00000368439 MIER1Q8N108 512 aa24.21■■□□□ 1.47
CKS1B-203ENST00000368439 SEC31BQ9NQW1 1179 aa24.21■■□□□ 1.47
CKS1B-203ENST00000368439 CASP7P55210 303 aa24.2■■□□□ 1.46
CKS1B-203ENST00000368439 GCKRQ14397 625 aa24.2■■□□□ 1.46
CKS1B-203ENST00000368439 C16orf71Q8IYS4 520 aaPredicted RBP24.2■■□□□ 1.46
CKS1B-203ENST00000368439 MPNDQ8N594 471 aa24.2■■□□□ 1.46
CKS1B-203ENST00000368439 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
CKS1B-203ENST00000368439 L3MBTL3Q96JM7 780 aaPredicted RBP24.2■■□□□ 1.46
CKS1B-203ENST00000368439 TMX4Q9H1E5 349 aaPredicted RBP24.2■■□□□ 1.46
CKS1B-203ENST00000368439 VPS33BQ9H267 617 aa24.2■■□□□ 1.46
CKS1B-203ENST00000368439 F6X3S4 739 aa24.19■■□□□ 1.46
CKS1B-203ENST00000368439 HSPA6P17066 643 aa24.19■■□□□ 1.46
CKS1B-203ENST00000368439 DPP8Q6V1X1 898 aaPredicted RBP24.19■■□□□ 1.46
CKS1B-203ENST00000368439 RPS8P62241 208 aaKnown RBP24.18■■□□□ 1.46
CKS1B-203ENST00000368439 CCDC152Q4G0S7 254 aa24.18■■□□□ 1.46
CKS1B-203ENST00000368439 LARGE2Q8N3Y3 721 aa24.18■■□□□ 1.46
CKS1B-203ENST00000368439 SUPT20HQ8NEM7 779 aa24.18■■□□□ 1.46
CKS1B-203ENST00000368439 JDP2Q8WYK2 163 aa24.18■■□□□ 1.46
CKS1B-203ENST00000368439 PPIP5K2O43314 1243 aa24.17■■□□□ 1.46
CKS1B-203ENST00000368439 AOC3Q16853 763 aa24.17■■□□□ 1.46
CKS1B-203ENST00000368439 BEND3Q5T5X7 828 aa24.17■■□□□ 1.46
CKS1B-203ENST00000368439 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
CKS1B-203ENST00000368439 TTLL11Q8NHH1 800 aa24.17■■□□□ 1.46
CKS1B-203ENST00000368439 CEP350Q5VT06 3117 aa24.16■■□□□ 1.46
CKS1B-203ENST00000368439 CTSWP56202 376 aa24.16■■□□□ 1.46
CKS1B-203ENST00000368439 FSTL1Q12841 308 aa24.16■■□□□ 1.46
CKS1B-203ENST00000368439 MRPL50Q8N5N7 158 aaKnown RBP24.16■■□□□ 1.46
CKS1B-203ENST00000368439 CCDC85AQ96PX6 553 aaPredicted RBP24.16■■□□□ 1.46
CKS1B-203ENST00000368439 PLA2G12BQ9BX93 195 aa24.16■■□□□ 1.46
CKS1B-203ENST00000368439 GPSM2P81274 684 aa24.15■■□□□ 1.46
CKS1B-203ENST00000368439 KIAA2012Q0VF49 1180 aa24.15■■□□□ 1.46
CKS1B-203ENST00000368439 SPEF2Q9C093 1822 aa24.14■■□□□ 1.46
CKS1B-203ENST00000368439 GPC2Q8N158 579 aa24.14■■□□□ 1.45
CKS1B-203ENST00000368439 RTL9Q8NET4 1388 aa24.14■■□□□ 1.45
CKS1B-203ENST00000368439 NIM1KQ8IY84 436 aa24.13■■□□□ 1.45
CKS1B-203ENST00000368439 SMC1BQ8NDV3 1235 aa24.13■■□□□ 1.45
CKS1B-203ENST00000368439 NSFL1CQ9UNZ2 370 aaKnown RBP24.13■■□□□ 1.45
CKS1B-203ENST00000368439 EIF6P56537 245 aaKnown RBP24.12■■□□□ 1.45
CKS1B-203ENST00000368439 SSH1Q8WYL5 1049 aa24.12■■□□□ 1.45
CKS1B-203ENST00000368439 GREM2Q9H772 168 aa24.12■■□□□ 1.45
CKS1B-203ENST00000368439 POLLQ9UGP5 575 aa24.12■■□□□ 1.45
CKS1B-203ENST00000368439 ADAMTSL1Q8N6G6 1762 aa24.11■■□□□ 1.45
CKS1B-203ENST00000368439 TAF1DQ9H5J8 278 aaPredicted RBP24.11■■□□□ 1.45
CKS1B-203ENST00000368439 PODXL2Q9NZ53 605 aa24.11■■□□□ 1.45
CKS1B-203ENST00000368439 ZNRF3Q9ULT6 936 aa24.11■■□□□ 1.45
CKS1B-203ENST00000368439 IQCA1LA6NCM1 817 aa24.1■■□□□ 1.45
CKS1B-203ENST00000368439 CSF1RP07333 972 aa24.1■■□□□ 1.45
CKS1B-203ENST00000368439 POTEIP0CG38 1075 aa24.1■■□□□ 1.45
CKS1B-203ENST00000368439 POTEJP0CG39 1038 aa24.1■■□□□ 1.45
CKS1B-203ENST00000368439 ANKRD18AQ8IVF6 992 aa24.09■■□□□ 1.45
CKS1B-203ENST00000368439 TBC1D16Q8TBP0 767 aa24.09■■□□□ 1.45
CKS1B-203ENST00000368439 CXCL9Q07325 125 aa24.08■■□□□ 1.45
CKS1B-203ENST00000368439 HACL1Q9UJ83 578 aa24.08■■□□□ 1.45
CKS1B-203ENST00000368439 GJA3Q9Y6H8 435 aa24.08■■□□□ 1.45
CKS1B-203ENST00000368439 YDJCA8MPS7 323 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 ALDH1L1O75891 902 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 SCNN1DP51172 638 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 FOXO4P98177 505 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 WASHC4Q2M389 1173 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 ALDH1L2Q3SY69 923 aa24.07■■□□□ 1.44
CKS1B-203ENST00000368439 CDC5LQ99459 802 aaKnown RBP24.07■■□□□ 1.44
CKS1B-203ENST00000368439 C6orf229H3BNL8 230 aa24.06■■□□□ 1.44
CKS1B-203ENST00000368439 APLP1P51693 650 aa24.06■■□□□ 1.44
CKS1B-203ENST00000368439 GPR101Q96P66 508 aaPredicted RBP24.06■■□□□ 1.44
CKS1B-203ENST00000368439 BCL2L13Q9BXK5 485 aa24.06■■□□□ 1.44
CKS1B-203ENST00000368439 BSDC1Q9NW68 430 aaPredicted RBP24.06■■□□□ 1.44
CKS1B-203ENST00000368439 PTPRCP08575 1304 aa24.06■■□□□ 1.44
CKS1B-203ENST00000368439 GRM8O00222 908 aa24.05■■□□□ 1.44
CKS1B-203ENST00000368439 EPHX2P34913 555 aa24.05■■□□□ 1.44
CKS1B-203ENST00000368439 FAM161AQ3B820 660 aa24.05■■□□□ 1.44
CKS1B-203ENST00000368439 SLC4A10Q6U841 1118 aa24.05■■□□□ 1.44
CKS1B-203ENST00000368439 SRCIN1Q9C0H9 1055 aa24.05■■□□□ 1.44
CKS1B-203ENST00000368439 SCN9AQ15858 1988 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms