RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 C3orf67Q6ZVT6 689 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 C7orf43Q8WVR3 580 aa15.93■□□□□ 0.14
EFNA1-201ENST00000368406 RBM17Q96I25 401 aaKnown RBP15.93■□□□□ 0.14
EFNA1-201ENST00000368406 C21orf2O43822 256 aa15.92■□□□□ 0.14
EFNA1-201ENST00000368406 RLBP1P12271 317 aa15.92■□□□□ 0.14
EFNA1-201ENST00000368406 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
EFNA1-201ENST00000368406 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
EFNA1-201ENST00000368406 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
EFNA1-201ENST00000368406 LAMB2P55268 1798 aa15.91■□□□□ 0.14
EFNA1-201ENST00000368406 GRM8O00222 908 aa15.91■□□□□ 0.14
EFNA1-201ENST00000368406 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
EFNA1-201ENST00000368406 MVPQ14764 893 aaKnown RBP15.91■□□□□ 0.14
EFNA1-201ENST00000368406 SF3B3Q15393 1217 aaKnown RBP15.91■□□□□ 0.14
EFNA1-201ENST00000368406 NEFLP07196 543 aa15.9■□□□□ 0.14
EFNA1-201ENST00000368406 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
EFNA1-201ENST00000368406 JARID2Q92833 1246 aaPredicted RBP15.9■□□□□ 0.14
EFNA1-201ENST00000368406 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
EFNA1-201ENST00000368406 CDHR2Q9BYE9 1310 aa15.89■□□□□ 0.13
EFNA1-201ENST00000368406 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
EFNA1-201ENST00000368406 H7C1W4 665 aa15.89■□□□□ 0.13
EFNA1-201ENST00000368406 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
EFNA1-201ENST00000368406 GRIPAP1Q4V328 841 aa15.89■□□□□ 0.13
EFNA1-201ENST00000368406 CC2D2BQ6DHV5 1058 aa15.89■□□□□ 0.13
EFNA1-201ENST00000368406 CHMP4BQ9H444 224 aaKnown RBP15.89■□□□□ 0.13
EFNA1-201ENST00000368406 BBOX1O75936 387 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 GNAI3P08754 354 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
EFNA1-201ENST00000368406 RTKN2Q8IZC4 609 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 HDAC5Q9UQL6 1122 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 MYH3P11055 1940 aa15.88■□□□□ 0.13
EFNA1-201ENST00000368406 CACNA1SQ13698 1873 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 FER1L6Q2WGJ9 1857 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 NFKBIEO00221 500 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 PDE8AO60658 829 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 LMNB1P20700 586 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 CCDC93Q567U6 631 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 MEIS3Q99687 375 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 SBF1O95248 1867 aa15.87■□□□□ 0.13
EFNA1-201ENST00000368406 C9orf131Q5VYM1 1079 aa15.86■□□□□ 0.13
EFNA1-201ENST00000368406 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
EFNA1-201ENST00000368406 TAOK3Q9H2K8 898 aa15.86■□□□□ 0.13
EFNA1-201ENST00000368406 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
EFNA1-201ENST00000368406 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
EFNA1-201ENST00000368406 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
EFNA1-201ENST00000368406 GRAPQ13588 217 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 TMC4Q7Z404 712 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
EFNA1-201ENST00000368406 USP44Q9H0E7 712 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 CHMP3Q9Y3E7 222 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 CASP7P55210 303 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 RASSF7Q02833 373 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
EFNA1-201ENST00000368406 PLA2G12BQ9BX93 195 aa15.85■□□□□ 0.13
EFNA1-201ENST00000368406 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
EFNA1-201ENST00000368406 GNAI2P04899 355 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 SUCLG2Q96I99 432 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 PSMD1Q99460 953 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
EFNA1-201ENST00000368406 RNF181Q9P0P0 153 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
EFNA1-201ENST00000368406 SNED1Q8TER0 1413 aa15.84■□□□□ 0.13
EFNA1-201ENST00000368406 UTYO14607 1347 aa15.83■□□□□ 0.13
EFNA1-201ENST00000368406 PRELPP51888 382 aa15.83■□□□□ 0.12
EFNA1-201ENST00000368406 CTSWP56202 376 aa15.83■□□□□ 0.12
EFNA1-201ENST00000368406 FKBP4Q02790 459 aaKnown RBP eCLIP15.83■□□□□ 0.12
EFNA1-201ENST00000368406 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
EFNA1-201ENST00000368406 TTLL11Q8NHH1 800 aa15.83■□□□□ 0.12
EFNA1-201ENST00000368406 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
EFNA1-201ENST00000368406 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
EFNA1-201ENST00000368406 CCDC85AQ96PX6 553 aaPredicted RBP15.82■□□□□ 0.12
EFNA1-201ENST00000368406 RTL9Q8NET4 1388 aa15.81■□□□□ 0.12
EFNA1-201ENST00000368406 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
EFNA1-201ENST00000368406 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
EFNA1-201ENST00000368406 BICC1Q9H694 974 aaKnown RBP15.81■□□□□ 0.12
EFNA1-201ENST00000368406 CCDC88AQ3V6T2 1871 aa15.81■□□□□ 0.12
EFNA1-201ENST00000368406 CSF1RP07333 972 aa15.8■□□□□ 0.12
EFNA1-201ENST00000368406 EXOC6Q8TAG9 804 aa15.8■□□□□ 0.12
EFNA1-201ENST00000368406 TAF1P21675 1872 aa15.8■□□□□ 0.12
EFNA1-201ENST00000368406 SPEF2Q9C093 1822 aa15.8■□□□□ 0.12
EFNA1-201ENST00000368406 DICER1Q9UPY3 1922 aaKnown RBP15.79■□□□□ 0.12
EFNA1-201ENST00000368406 TAF7LQ5H9L4 462 aa15.79■□□□□ 0.12
EFNA1-201ENST00000368406 LMBR1LQ6UX01 489 aa15.79■□□□□ 0.12
EFNA1-201ENST00000368406 RTFDC1Q9BY42 306 aaPredicted RBP15.79■□□□□ 0.12
EFNA1-201ENST00000368406 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
EFNA1-201ENST00000368406 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
EFNA1-201ENST00000368406 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
EFNA1-201ENST00000368406 CDC5LQ99459 802 aaKnown RBP15.78■□□□□ 0.12
EFNA1-201ENST00000368406 GREM2Q9H772 168 aa15.78■□□□□ 0.12
EFNA1-201ENST00000368406 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
EFNA1-201ENST00000368406 FOXO4P98177 505 aa15.77■□□□□ 0.12
EFNA1-201ENST00000368406 IFIT5Q13325 482 aaKnown RBP15.77■□□□□ 0.12
EFNA1-201ENST00000368406 CCDC57Q2TAC2 916 aa15.77■□□□□ 0.12
EFNA1-201ENST00000368406 FAM161AQ3B820 660 aa15.77■□□□□ 0.12
EFNA1-201ENST00000368406 ANKRD18AQ8IVF6 992 aa15.77■□□□□ 0.12
EFNA1-201ENST00000368406 MPNDQ8N594 471 aa15.77■□□□□ 0.12
EFNA1-201ENST00000368406 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms