RNA–Protein interactions for RNA: ENST00000368393.7

MUC1-208, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-208ENST00000368393 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
MUC1-208ENST00000368393 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
MUC1-208ENST00000368393 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
MUC1-208ENST00000368393 BCS1LQ9Y276 419 aa16.62■□□□□ 0.25
MUC1-208ENST00000368393 LAMB2P55268 1798 aa16.61■□□□□ 0.25
MUC1-208ENST00000368393 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
MUC1-208ENST00000368393 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
MUC1-208ENST00000368393 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
MUC1-208ENST00000368393 TMEM57Q8N5G2 664 aa16.61■□□□□ 0.25
MUC1-208ENST00000368393 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
MUC1-208ENST00000368393 NFKBIEO00221 500 aa16.6■□□□□ 0.25
MUC1-208ENST00000368393 PLIN1O60240 522 aa16.6■□□□□ 0.25
MUC1-208ENST00000368393 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
MUC1-208ENST00000368393 GREM2Q9H772 168 aa16.6■□□□□ 0.25
MUC1-208ENST00000368393 NPHP1O15259 732 aa16.59■□□□□ 0.25
MUC1-208ENST00000368393 GRAPQ13588 217 aa16.59■□□□□ 0.25
MUC1-208ENST00000368393 C20orf194Q5TEA3 1177 aa16.59■□□□□ 0.25
MUC1-208ENST00000368393 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
MUC1-208ENST00000368393 MEIS3Q99687 375 aa16.59■□□□□ 0.25
MUC1-208ENST00000368393 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
MUC1-208ENST00000368393 C21orf2O43822 256 aa16.58■□□□□ 0.24
MUC1-208ENST00000368393 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
MUC1-208ENST00000368393 GPR162Q16538 588 aa16.58■□□□□ 0.24
MUC1-208ENST00000368393 DZIP1LQ8IYY4 767 aaKnown RBP16.58■□□□□ 0.24
MUC1-208ENST00000368393 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
MUC1-208ENST00000368393 ARFGEF1Q9Y6D6 1849 aa16.57■□□□□ 0.24
MUC1-208ENST00000368393 BBOX1O75936 387 aa16.57■□□□□ 0.24
MUC1-208ENST00000368393 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
MUC1-208ENST00000368393 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
MUC1-208ENST00000368393 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
MUC1-208ENST00000368393 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
MUC1-208ENST00000368393 ATP6V0A2Q9Y487 856 aa16.57■□□□□ 0.24
MUC1-208ENST00000368393 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
MUC1-208ENST00000368393 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
MUC1-208ENST00000368393 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
MUC1-208ENST00000368393 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
MUC1-208ENST00000368393 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
MUC1-208ENST00000368393 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
MUC1-208ENST00000368393 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
MUC1-208ENST00000368393 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
MUC1-208ENST00000368393 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
MUC1-208ENST00000368393 SP8Q8IXZ3 490 aa16.55■□□□□ 0.24
MUC1-208ENST00000368393 PPEF1O14829 653 aaPredicted RBP16.54■□□□□ 0.24
MUC1-208ENST00000368393 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
MUC1-208ENST00000368393 RASSF7Q02833 373 aa16.54■□□□□ 0.24
MUC1-208ENST00000368393 TAF1P21675 1872 aa16.54■□□□□ 0.24
MUC1-208ENST00000368393 DUOX1Q9NRD9 1551 aa16.53■□□□□ 0.24
MUC1-208ENST00000368393 WTIPA6NIX2 430 aaPredicted RBP16.53■□□□□ 0.24
MUC1-208ENST00000368393 ITGA6P23229 1130 aa16.53■□□□□ 0.24
MUC1-208ENST00000368393 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
MUC1-208ENST00000368393 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
MUC1-208ENST00000368393 RTFDC1Q9BY42 306 aaPredicted RBP16.53■□□□□ 0.24
MUC1-208ENST00000368393 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
MUC1-208ENST00000368393 MTX1Q13505 466 aa16.52■□□□□ 0.24
MUC1-208ENST00000368393 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.24
MUC1-208ENST00000368393 LRRFIP2Q9Y608 721 aaKnown RBP16.52■□□□□ 0.24
MUC1-208ENST00000368393 LRRC37AA6NMS7 1700 aa16.52■□□□□ 0.24
MUC1-208ENST00000368393 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
MUC1-208ENST00000368393 COL4A5P29400 1685 aa16.52■□□□□ 0.23
MUC1-208ENST00000368393 FER1L6Q2WGJ9 1857 aa16.51■□□□□ 0.23
MUC1-208ENST00000368393 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
MUC1-208ENST00000368393 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
MUC1-208ENST00000368393 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
MUC1-208ENST00000368393 ARHGAP27Q6ZUM4 889 aa16.51■□□□□ 0.23
MUC1-208ENST00000368393 PSMD1Q99460 953 aa16.51■□□□□ 0.23
MUC1-208ENST00000368393 IRS2Q9Y4H2 1338 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 GPSM2P81274 684 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
MUC1-208ENST00000368393 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
MUC1-208ENST00000368393 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
MUC1-208ENST00000368393 GNAI3P08754 354 aa16.49■□□□□ 0.23
MUC1-208ENST00000368393 UBTFL1P0CB47 393 aaPredicted RBP16.49■□□□□ 0.23
MUC1-208ENST00000368393 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
MUC1-208ENST00000368393 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
MUC1-208ENST00000368393 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
MUC1-208ENST00000368393 POLLQ9UGP5 575 aa16.49■□□□□ 0.23
MUC1-208ENST00000368393 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
MUC1-208ENST00000368393 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
MUC1-208ENST00000368393 ANKRD18AQ8IVF6 992 aa16.48■□□□□ 0.23
MUC1-208ENST00000368393 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
MUC1-208ENST00000368393 CDC5LQ99459 802 aaKnown RBP16.48■□□□□ 0.23
MUC1-208ENST00000368393 PUS3Q9BZE2 481 aaKnown RBP16.48■□□□□ 0.23
MUC1-208ENST00000368393 RIPOR2Q9Y4F9 1068 aa16.48■□□□□ 0.23
MUC1-208ENST00000368393 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
MUC1-208ENST00000368393 IFIT5Q13325 482 aaKnown RBP16.47■□□□□ 0.23
MUC1-208ENST00000368393 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
MUC1-208ENST00000368393 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
MUC1-208ENST00000368393 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
MUC1-208ENST00000368393 MYH3P11055 1940 aa16.47■□□□□ 0.23
MUC1-208ENST00000368393 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 GNAI2P04899 355 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 POLA2Q14181 598 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 GRIPAP1Q4V328 841 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 C9orf131Q5VYM1 1079 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
MUC1-208ENST00000368393 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms