RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 CALML4Q96GE6 196 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 RPGRIP1LQ68CZ1 1315 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 SNRPA1P09661 255 aaKnown RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 EPB41L2O43491 1005 aaKnown RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 CCDC192P0DO97 292 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 MX1P20591 662 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 ZMAT2Q96NC0 199 aaKnown RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 MAGEB6Q8N7X4 407 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 CNGA1P29973 690 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 TDRD12Q587J7 1177 aaKnown RBP8.11□□□□□ -1.11
SPTA1-201ENST00000368147 SKAP1Q86WV1 359 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 PPP1R9BQ96SB3 815 aa8.11□□□□□ -1.11
SPTA1-201ENST00000368147 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 GPATCH11Q8N954 259 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 CCDC141Q6ZP82 1450 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 SEPT8Q92599 483 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 UPF3BQ9BZI7 483 aaKnown RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 DBF4Q9UBU7 674 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 GSTTP1A0A1W2PQM5 241 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 BIN1O00499 593 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 RAB11FIP3O75154 756 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 IL2RBP14784 551 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 GOLGA6L9A6NEM1 432 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 GCOM1H8Y6P7 765 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 MYZAPP0CAP1 466 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 FERP16591 822 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 CHST3Q7LGC8 479 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 FILIP1Q7Z7B0 1213 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 FAM170AA1A519 330 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 LDHCP07864 332 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 KRT32Q14532 448 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 NAA16Q6N069 864 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 HOMEZQ8IX15 550 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 SMARCC2Q8TAQ2 1214 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 ARAP1Q96P48 1450 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 MAGEB6P1A0A0J9YX57 407 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 KIF5BP33176 963 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 MKRN3Q13064 507 aaKnown RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 ZBTB9Q96C00 473 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 RAB34Q9BZG1 259 aa8.1□□□□□ -1.11
SPTA1-201ENST00000368147 FEZ2Q9UHY8 353 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-201ENST00000368147 ZFYP08048 801 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 MCM2P49736 904 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 SSX2IPQ9Y2D8 614 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 CUL7Q14999 1698 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 ANKRD13DQ6ZTN6 518 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 COPS6Q7L5N1 327 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 TMOD4Q9NZQ9 345 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 NCBP1Q09161 790 aaKnown RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 RBM10P98175 930 aaKnown RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 ZBTB17Q13105 803 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 CCDC40Q4G0X9 1142 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 RNF41Q9H4P4 317 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 WDR33Q9C0J8 1336 aaKnown RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 TOP2BQ02880 1626 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 H0YIN7 160 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 SPA17Q15506 151 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 HFM1A2PYH4 1435 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 DDX39AO00148 427 aaKnown RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 CBFA2T2O43439 604 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 PPFIA2O75334 1257 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 CETN2P41208 172 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.11
SPTA1-201ENST00000368147 HSP90AA4PQ58FG1 418 aa8.09□□□□□ -1.11
SPTA1-201ENST00000368147 METAP2P50579 478 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPTA1-201ENST00000368147 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 SREK1Q8WXA9 508 aaKnown RBP8.08□□□□□ -1.12
SPTA1-201ENST00000368147 GPHNQ9NQX3 736 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-201ENST00000368147 KIF21AQ7Z4S6 1674 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 UFL1O94874 794 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 CNNM3Q8NE01 707 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 PLIN2Q99541 437 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 NUP62CLQ9H1M0 184 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 NOP2P46087 812 aaKnown RBP8.08□□□□□ -1.12
SPTA1-201ENST00000368147 TPTE2Q6XPS3 522 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 EFCAB5A4FU69 1503 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 OPA1O60313 960 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 KCNA4P22459 653 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 MRVI1Q9Y6F6 885 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 GLRX3O76003 335 aaKnown RBP8.08□□□□□ -1.12
SPTA1-201ENST00000368147 STMN1P16949 149 aa8.08□□□□□ -1.12
SPTA1-201ENST00000368147 AFMP43652 599 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms