RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 NBPF7P0C2Y1 421 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 UQCRFS1P1P0C7P4 283 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ZNF445P59923 1031 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 DNM1Q05193 864 aaKnown RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 SPECC1Q5M775 1068 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CEP85Q6P2H3 762 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 TMOD3Q9NYL9 352 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 RANBP6O60518 1105 aaKnown RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 USP5P45974 858 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CNNM2Q9H8M5 875 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 FAM83GA6ND36 823 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 CETN1Q12798 172 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 DNAI1Q9UI46 699 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ZC3H6P61129 1189 aaKnown RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 TNIP1Q15025 636 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 MFSD6Q6ZSS7 791 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
SHPRH-203ENST00000367505 NECAB1Q8N987 351 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 KRT23Q9C075 422 aa9.49□□□□□ -0.89
SHPRH-203ENST00000367505 TSHZ3Q63HK5 1081 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 SPECC1LQ69YQ0 1117 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 HLTFQ14527 1009 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■■□□□ 13
SHPRH-203ENST00000367505 CCDC178Q5BJE1 867 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
SHPRH-203ENST00000367505 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
SHPRH-203ENST00000367505 SLF2Q8IX21 1173 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 MICU3Q86XE3 530 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC85AQ96PX6 553 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-203ENST00000367505 DNAJC25Q9H1X3 360 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 KLF18A0A0U1RQI7 1052 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 ZBTB43O43298 467 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 SNRPA1P09661 255 aaKnown RBP9.48□□□□□ -0.89
SHPRH-203ENST00000367505 C8orf58Q8NAV2 365 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 GOLGA1Q92805 767 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 ZNF830Q96NB3 372 aaPredicted RBP9.48□□□□□ -0.89
SHPRH-203ENST00000367505 GRM8O00222 908 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 OGFRQ9NZT2 677 aa9.48□□□□□ -0.89
SHPRH-203ENST00000367505 SYT1P21579 422 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 HSF2BPO75031 334 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 SMAP1Q8IYB5 467 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 AOPEPQ8N6M6 819 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 PIBF1Q8WXW3 757 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 JADE2Q9NQC1 790 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 URB2Q14146 1524 aaKnown RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 SPTLC2O15270 562 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 CHMLP26374 656 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 RNF187Q5TA31 235 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 LDHAL6AQ6ZMR3 332 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 DZIP1Q86YF9 867 aaKnown RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 DDX12PQ92771 950 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 ALG1Q9BT22 464 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 AMOTL2Q9Y2J4 779 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 V9GYY5 206 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 AOX1Q06278 1338 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 PDE4BQ07343 736 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 KSR2Q6VAB6 950 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 CNKSR2Q8WXI2 1034 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 SLC26A6Q9BXS9 759 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 TRMT112Q9UI30 125 aaKnown RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 RTL1A6NKG5 1358 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 CTAGE9A4FU28 777 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 OPA1O60313 960 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 SEC24BO95487 1268 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC172P0C7W6 258 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 AK2P54819 239 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 STXBP4Q6ZWJ1 553 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 CCDC82Q8N4S0 544 aa9.47□□□□□ -0.89
SHPRH-203ENST00000367505 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
SHPRH-203ENST00000367505 PLCH2O75038 1416 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 AKR1B10O60218 316 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.89
SHPRH-203ENST00000367505 SPINK5Q9NQ38 1064 aaPredicted RBP9.46□□□□□ -0.89
SHPRH-203ENST00000367505 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.46□□□□□ -0.89
SHPRH-203ENST00000367505 ACEP12821 1306 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 KRT83P78385 493 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 LINS1Q8NG48 757 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 GSTTP1A0A1W2PQM5 241 aa9.46□□□□□ -0.89
SHPRH-203ENST00000367505 IL15P40933 162 aaPredicted RBP9.46□□□□□ -0.89
SHPRH-203ENST00000367505 LDHCP07864 332 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 CCDC40Q4G0X9 1142 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 Q6ZUG5 572 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 CCDC113Q9H0I3 377 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 ZBTB7BO15156 539 aaPredicted RBP9.46□□□□□ -0.9
SHPRH-203ENST00000367505 WTAPQ15007 396 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 USHBP1Q8N6Y0 703 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
SHPRH-203ENST00000367505 CDC5LQ99459 802 aaKnown RBP9.46□□□□□ -0.9
SHPRH-203ENST00000367505 PSMA7O14818 248 aa9.45□□□□□ -0.9
SHPRH-203ENST00000367505 TUBB2AQ13885 445 aa9.45□□□□□ -0.9
SHPRH-203ENST00000367505 ZGPATQ8N5A5 531 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms