RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 CELF1Q92879 486 aaKnown RBP25.3■■□□□ 1.64
H3F3A-204ENST00000366816 SEC31BQ9NQW1 1179 aa25.3■■□□□ 1.64
H3F3A-204ENST00000366816 ZNF277Q9NRM2 450 aaPredicted RBP25.3■■□□□ 1.64
H3F3A-204ENST00000366816 ATP6V0A2Q9Y487 856 aa25.3■■□□□ 1.64
H3F3A-204ENST00000366816 CDHR2Q9BYE9 1310 aa25.3■■□□□ 1.64
H3F3A-204ENST00000366816 FKBP4Q02790 459 aaKnown RBP eCLIP25.29■■□□□ 1.64
H3F3A-204ENST00000366816 GPBP1L1Q9HC44 474 aaPredicted RBP25.29■■□□□ 1.64
H3F3A-204ENST00000366816 CCDC88AQ3V6T2 1871 aa25.28■■□□□ 1.64
H3F3A-204ENST00000366816 CT47B1P0C2W7 299 aaPredicted RBP25.28■■□□□ 1.64
H3F3A-204ENST00000366816 HSP90B1P14625 803 aaKnown RBP25.28■■□□□ 1.64
H3F3A-204ENST00000366816 COL4A1P02462 1669 aa25.28■■□□□ 1.64
H3F3A-204ENST00000366816 CASP7P55210 303 aa25.27■■□□□ 1.64
H3F3A-204ENST00000366816 CC2D2BQ6DHV5 1058 aa25.27■■□□□ 1.64
H3F3A-204ENST00000366816 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
H3F3A-204ENST00000366816 CCDC152Q4G0S7 254 aa25.26■■□□□ 1.63
H3F3A-204ENST00000366816 SP8Q8IXZ3 490 aa25.26■■□□□ 1.63
H3F3A-204ENST00000366816 RARSP54136 660 aaKnown RBP25.25■■□□□ 1.63
H3F3A-204ENST00000366816 CTSWP56202 376 aa25.25■■□□□ 1.63
H3F3A-204ENST00000366816 TMX4Q9H1E5 349 aaPredicted RBP25.25■■□□□ 1.63
H3F3A-204ENST00000366816 PTPRCP08575 1304 aa25.25■■□□□ 1.63
H3F3A-204ENST00000366816 ZBED9Q6R2W3 1325 aa25.25■■□□□ 1.63
H3F3A-204ENST00000366816 TTLL11Q8NHH1 800 aa25.24■■□□□ 1.63
H3F3A-204ENST00000366816 PSMD1Q99460 953 aa25.24■■□□□ 1.63
H3F3A-204ENST00000366816 SRCIN1Q9C0H9 1055 aa25.24■■□□□ 1.63
H3F3A-204ENST00000366816 NOB1Q9ULX3 412 aaKnown RBP25.24■■□□□ 1.63
H3F3A-204ENST00000366816 RPS8P62241 208 aaKnown RBP25.23■■□□□ 1.63
H3F3A-204ENST00000366816 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
H3F3A-204ENST00000366816 GREM2Q9H772 168 aa25.22■■□□□ 1.63
H3F3A-204ENST00000366816 ALDH1L1O75891 902 aa25.21■■□□□ 1.63
H3F3A-204ENST00000366816 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
H3F3A-204ENST00000366816 NMRK2Q9NPI5 230 aa25.21■■□□□ 1.63
H3F3A-204ENST00000366816 C9orf78Q9NZ63 289 aaPredicted RBP25.21■■□□□ 1.63
H3F3A-204ENST00000366816 GRM8O00222 908 aa25.2■■□□□ 1.62
H3F3A-204ENST00000366816 DPP8Q6V1X1 898 aaPredicted RBP25.2■■□□□ 1.62
H3F3A-204ENST00000366816 MPNDQ8N594 471 aa25.2■■□□□ 1.62
H3F3A-204ENST00000366816 PLA2G12BQ9BX93 195 aa25.2■■□□□ 1.62
H3F3A-204ENST00000366816 TIAM2Q8IVF5 1701 aa25.2■■□□□ 1.62
H3F3A-204ENST00000366816 ZC3H4Q9UPT8 1303 aaKnown RBP25.19■■□□□ 1.62
H3F3A-204ENST00000366816 TMC4Q7Z404 712 aa25.19■■□□□ 1.62
H3F3A-204ENST00000366816 BCAR3O75815 825 aa25.18■■□□□ 1.62
H3F3A-204ENST00000366816 GPSM2P81274 684 aa25.18■■□□□ 1.62
H3F3A-204ENST00000366816 FOXO4P98177 505 aa25.18■■□□□ 1.62
H3F3A-204ENST00000366816 NSFL1CQ9UNZ2 370 aaKnown RBP25.18■■□□□ 1.62
H3F3A-204ENST00000366816 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
H3F3A-204ENST00000366816 KDM2BQ8NHM5 1336 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 GLTPD2A6NH11 291 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 CSF1RP07333 972 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 BRPF1P55201 1214 aaPredicted RBP25.17■■□□□ 1.62
H3F3A-204ENST00000366816 AOC3Q16853 763 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 EPHA10Q5JZY3 1008 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 ANKRD18AQ8IVF6 992 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 RRAGCQ9HB90 399 aa25.17■■□□□ 1.62
H3F3A-204ENST00000366816 NBPF7P0C2Y1 421 aaPredicted RBP25.16■■□□□ 1.62
H3F3A-204ENST00000366816 FAM161AQ3B820 660 aa25.16■■□□□ 1.62
H3F3A-204ENST00000366816 LARGE2Q8N3Y3 721 aa25.16■■□□□ 1.62
H3F3A-204ENST00000366816 RTFDC1Q9BY42 306 aaPredicted RBP25.16■■□□□ 1.62
H3F3A-204ENST00000366816 COL4A5P29400 1685 aa25.16■■□□□ 1.62
H3F3A-204ENST00000366816 KIF3CO14782 793 aa25.15■■□□□ 1.62
H3F3A-204ENST00000366816 PPIP5K2O43314 1243 aa25.15■■□□□ 1.62
H3F3A-204ENST00000366816 DPY19L2Q6NUT2 758 aa25.15■■□□□ 1.62
H3F3A-204ENST00000366816 DDNO94850 711 aaPredicted RBP25.14■■□□□ 1.62
H3F3A-204ENST00000366816 ITGA6P23229 1130 aa25.14■■□□□ 1.62
H3F3A-204ENST00000366816 SUPT20HQ8NEM7 779 aa25.14■■□□□ 1.62
H3F3A-204ENST00000366816 JDP2Q8WYK2 163 aa25.14■■□□□ 1.62
H3F3A-204ENST00000366816 CDC5LQ99459 802 aaKnown RBP25.14■■□□□ 1.62
H3F3A-204ENST00000366816 MYH3P11055 1940 aa25.14■■□□□ 1.61
H3F3A-204ENST00000366816 ZNF541Q9H0D2 1346 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 LMBR1LQ6UX01 489 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 FRAT1Q92837 279 aaPredicted RBP25.13■■□□□ 1.61
H3F3A-204ENST00000366816 SUCLG2Q96I99 432 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 GPR101Q96P66 508 aaPredicted RBP25.13■■□□□ 1.61
H3F3A-204ENST00000366816 POLLQ9UGP5 575 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 CHMP3Q9Y3E7 222 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 RTL9Q8NET4 1388 aa25.13■■□□□ 1.61
H3F3A-204ENST00000366816 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 C6orf229H3BNL8 230 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 FZD9O00144 591 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 KAZALD1Q96I82 304 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 API5Q9BZZ5 524 aaKnown RBP25.12■■□□□ 1.61
H3F3A-204ENST00000366816 ANKIB1Q9P2G1 1089 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 UTYO14607 1347 aa25.12■■□□□ 1.61
H3F3A-204ENST00000366816 DUOX1Q9NRD9 1551 aa25.11■■□□□ 1.61
H3F3A-204ENST00000366816 C1QTNF8P60827 252 aa25.11■■□□□ 1.61
H3F3A-204ENST00000366816 USP44Q9H0E7 712 aa25.11■■□□□ 1.61
H3F3A-204ENST00000366816 TNNQ9UQP3 1299 aa25.11■■□□□ 1.61
H3F3A-204ENST00000366816 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
H3F3A-204ENST00000366816 RIMBP2O15034 1052 aa25.1■■□□□ 1.61
H3F3A-204ENST00000366816 NIM1KQ8IY84 436 aa25.1■■□□□ 1.61
H3F3A-204ENST00000366816 TBC1D16Q8TBP0 767 aa25.1■■□□□ 1.61
H3F3A-204ENST00000366816 BSDC1Q9NW68 430 aaPredicted RBP25.1■■□□□ 1.61
H3F3A-204ENST00000366816 ANKRD18BA2A2Z9 1011 aa25.09■■□□□ 1.61
H3F3A-204ENST00000366816 WTIPA6NIX2 430 aaPredicted RBP25.09■■□□□ 1.61
H3F3A-204ENST00000366816 POTECB2RU33 542 aa25.09■■□□□ 1.61
H3F3A-204ENST00000366816 CCT4P50991 539 aaKnown RBP25.09■■□□□ 1.61
H3F3A-204ENST00000366816 KIAA2012Q0VF49 1180 aa25.09■■□□□ 1.61
H3F3A-204ENST00000366816 VPS33BQ9H267 617 aa25.09■■□□□ 1.61
H3F3A-204ENST00000366816 MINPP1Q9UNW1 487 aa25.09■■□□□ 1.61
H3F3A-204ENST00000366816 IGHMBP2P38935 993 aaKnown RBP25.08■■□□□ 1.61
H3F3A-204ENST00000366816 IFIT5Q13325 482 aaKnown RBP25.08■■□□□ 1.61
H3F3A-204ENST00000366816 WASHC4Q2M389 1173 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms