RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
PDLIM5-203ENST00000359265 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
PDLIM5-203ENST00000359265 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
PDLIM5-203ENST00000359265 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 ZPR1O75312 459 aa17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
PDLIM5-203ENST00000359265 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 GPTP24298 496 aa17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 RFC4P35249 363 aa17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 DDX60Q8IY21 1712 aaKnown RBP17.12■□□□□ 0.33
PDLIM5-203ENST00000359265 APBB1O00213 710 aa17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 PHF14O94880 888 aa17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
PDLIM5-203ENST00000359265 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 FSTL1Q12841 308 aa17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 ERC1Q8IUD2 1116 aa17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
PDLIM5-203ENST00000359265 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
PDLIM5-203ENST00000359265 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
PDLIM5-203ENST00000359265 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
PDLIM5-203ENST00000359265 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
PDLIM5-203ENST00000359265 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
PDLIM5-203ENST00000359265 UBN2Q6ZU65 1347 aa17.08■□□□□ 0.32
PDLIM5-203ENST00000359265 FOXO4P98177 505 aa17.08■□□□□ 0.32
PDLIM5-203ENST00000359265 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
PDLIM5-203ENST00000359265 USPL1Q5W0Q7 1092 aa17.08■□□□□ 0.32
PDLIM5-203ENST00000359265 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 RHPN1Q8TCX5 695 aa17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 CHMP3Q9Y3E7 222 aa17.07■□□□□ 0.32
PDLIM5-203ENST00000359265 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 FAM89AQ96GI7 184 aa17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
PDLIM5-203ENST00000359265 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 HSP90B1P14625 803 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
PDLIM5-203ENST00000359265 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
PDLIM5-203ENST00000359265 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
PDLIM5-203ENST00000359265 BMP2KLQ5H9B9 411 aa17.04■□□□□ 0.32
PDLIM5-203ENST00000359265 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
PDLIM5-203ENST00000359265 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
PDLIM5-203ENST00000359265 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 PDE8AO60658 829 aa17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 SUSD4Q5VX71 490 aa17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 NYXQ9GZU5 481 aa17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
PDLIM5-203ENST00000359265 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 AOX1Q06278 1338 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 CTSWP56202 376 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 TBC1D9BQ66K14 1250 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 ARHGAP27Q6ZUM4 889 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 OTUD7AQ8TE49 926 aaPredicted RBP17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 RRAGCQ9HB90 399 aa17.02■□□□□ 0.32
PDLIM5-203ENST00000359265 SALL3Q9BXA9 1300 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 NTSR2O95665 410 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 CSF1RP07333 972 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 GYS1P13807 737 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 MX1P20591 662 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 TTC22Q5TAA0 569 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 KLHDC4Q8TBB5 520 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 SIL1Q9H173 461 aa17.01■□□□□ 0.31
PDLIM5-203ENST00000359265 PDE1AP54750 535 aa17■□□□□ 0.31
PDLIM5-203ENST00000359265 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
PDLIM5-203ENST00000359265 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 FAM177BA6PVY3 158 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 SASH1O94885 1247 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 C9orf131Q5VYM1 1079 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 SYNE4Q8N205 404 aa16.99■□□□□ 0.31
PDLIM5-203ENST00000359265 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms