RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 STK38Q15208 465 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
SIRPA-202ENST00000358771 PAG1Q9NWQ8 432 aa16.82■□□□□ 0.28
SIRPA-202ENST00000358771 KINO60870 393 aaKnown RBP16.81■□□□□ 0.28
SIRPA-202ENST00000358771 F13A1P00488 732 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 CYP27B1O15528 508 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 NRDCO43847 1150 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 IL15P40933 162 aaPredicted RBP16.81■□□□□ 0.28
SIRPA-202ENST00000358771 CCDC183Q5T5S1 534 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 ZSCAN30Q86W11 494 aa16.81■□□□□ 0.28
SIRPA-202ENST00000358771 CEP170BQ9Y4F5 1589 aaPredicted RBP16.81■□□□□ 0.28
SIRPA-202ENST00000358771 PI4K2BQ8TCG2 481 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 RBSNQ9H1K0 784 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 PCDH11XQ9BZA7 1347 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 PCDH11YQ9BZA8 1340 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 ERICH2A1L162 156 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 ANKRD18BA2A2Z9 1011 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 SLC27A2O14975 620 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 EPHA10Q5JZY3 1008 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 AIDAQ96BJ3 306 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 SASH1O94885 1247 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 LRSAM1Q6UWE0 723 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 TMEM63CQ9P1W3 806 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 LRP2BPQ9P2M1 347 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 AOX1Q06278 1338 aa16.8■□□□□ 0.28
SIRPA-202ENST00000358771 TULP1O00294 542 aaPredicted RBP16.79■□□□□ 0.28
SIRPA-202ENST00000358771 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
SIRPA-202ENST00000358771 POLA2Q14181 598 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
SIRPA-202ENST00000358771 UBE2HP62256 183 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
SIRPA-202ENST00000358771 ZNF213O14771 459 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 TDO2P48775 406 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 ATP2B3Q16720 1220 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
SIRPA-202ENST00000358771 MAP3K11Q16584 847 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
SIRPA-202ENST00000358771 IL25Q9H293 177 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
SIRPA-202ENST00000358771 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
SIRPA-202ENST00000358771 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.28
SIRPA-202ENST00000358771 BRD1O95696 1058 aa16.77■□□□□ 0.28
SIRPA-202ENST00000358771 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
SIRPA-202ENST00000358771 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
SIRPA-202ENST00000358771 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
SIRPA-202ENST00000358771 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
SIRPA-202ENST00000358771 RAI14Q9P0K7 980 aa16.77■□□□□ 0.27
SIRPA-202ENST00000358771 EYA2O00167 538 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 ME3Q16798 604 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 SCAND2PQ9GZW5 306 aaPredicted RBP16.76■□□□□ 0.27
SIRPA-202ENST00000358771 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 ADCY9O60503 1353 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 MINDY4BA8MYZ0 360 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 TPM4P67936 248 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 RBM10P98175 930 aaKnown RBP16.76■□□□□ 0.27
SIRPA-202ENST00000358771 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
SIRPA-202ENST00000358771 IGHMBP2P38935 993 aaKnown RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
SIRPA-202ENST00000358771 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
SIRPA-202ENST00000358771 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
SIRPA-202ENST00000358771 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
SIRPA-202ENST00000358771 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 MICU3Q86XE3 530 aa16.75■□□□□ 0.27
SIRPA-202ENST00000358771 TEX13AQ9BXU3 409 aaPredicted RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
SIRPA-202ENST00000358771 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
SIRPA-202ENST00000358771 JAK2O60674 1132 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 NAPBQ9H115 298 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
SIRPA-202ENST00000358771 KIF20BQ96Q89 1820 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
SIRPA-202ENST00000358771 LARGE1O95461 756 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 ZSCAN25Q6NSZ9 544 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
SIRPA-202ENST00000358771 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
SIRPA-202ENST00000358771 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
SIRPA-202ENST00000358771 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
SIRPA-202ENST00000358771 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
SIRPA-202ENST00000358771 HMGB1P09429 215 aaKnown RBP16.73■□□□□ 0.27
SIRPA-202ENST00000358771 RXRAP19793 462 aa16.73■□□□□ 0.27
SIRPA-202ENST00000358771 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
SIRPA-202ENST00000358771 CCDC191Q8NCU4 936 aa16.73■□□□□ 0.27
SIRPA-202ENST00000358771 KLF18A0A0U1RQI7 1052 aa16.72■□□□□ 0.27
SIRPA-202ENST00000358771 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms