RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ENOX2Q16206 610 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 HSP90AA4PQ58FG1 418 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 PA2G4Q9UQ80 394 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 CCDC194A0A1B0GVG4 234 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 MCM6Q14566 821 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 SEPT7Q16181 437 aaKnown RBP17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
TRAPPC11-202ENST00000357207 SPTLC2O15270 562 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 FGFR1OPO95684 399 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 TDRD12Q587J7 1177 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 ALG1Q9BT22 464 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 DNA2P51530 1060 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 MTHFSDQ2M296 383 aaKnown RBP17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
TRAPPC11-202ENST00000357207 CPA1P15085 419 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 TTF1Q15361 905 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 PLCH2O75038 1416 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 ZFYP08048 801 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 USP5P45974 858 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 MYRIPQ8NFW9 859 aa17.93■□□□□ 0.46
TRAPPC11-202ENST00000357207 LINS1Q8NG48 757 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 TSG101Q99816 390 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 MKNK2Q9HBH9 465 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 RTL1A6NKG5 1358 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 CTAGE15A4D2H0 777 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 CTAGE8P0CG41 777 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 SLC5A1P13866 664 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 UBA7P41226 1012 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 MICALCLQ6ZW33 695 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 CTAGE6Q86UF2 777 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 CTAGE4Q8IX94 777 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 PYM1Q9BRP8 204 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 TMEM63CQ9P1W3 806 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 SYCP2Q9BX26 1530 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 A0A1W2PP64 1363 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 ZBTB43O43298 467 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 GIMAP7Q8NHV1 300 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 IFNKQ9P0W0 207 aa17.92■□□□□ 0.46
TRAPPC11-202ENST00000357207 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 LIG1P18858 919 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 CAVIN4Q5BKX8 364 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 SYT10Q6XYQ8 523 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 JADE2Q9NQC1 790 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 A2MP01023 1474 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 ALS2CR12Q96Q35 445 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC11-202ENST00000357207 SNRPA1P09661 255 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 HLTFQ14527 1009 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 RNF187Q5TA31 235 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 COPS6Q7L5N1 327 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 SPAG1Q07617 926 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 XAGE3Q8WTP9 111 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 CTAGE1Q96RT6 745 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 TTC21AQ8NDW8 1320 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 RIOK3O14730 519 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 PPP1R12BO60237 982 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 IFNL2Q8IZJ0 200 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 ANKRD24Q8TF21 1146 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 PPP1R9BQ96SB3 815 aa17.9■□□□□ 0.46
TRAPPC11-202ENST00000357207 CCDC175P0C221 793 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 IFFO1Q0D2I5 559 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 MSH6P52701 1360 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 G2E3Q7L622 706 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 DHX32Q7L7V1 743 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 RAD50Q92878 1312 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 PTPDC1A2A3K4 754 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 DYDC1Q8WWB3 177 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.45
TRAPPC11-202ENST00000357207 C17orf53Q8N3J3 647 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 AFMP43652 599 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 CCDC178Q5BJE1 867 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 AKR1B10O60218 316 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 IVLP07476 585 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 IDEP14735 1019 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms