RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TUBB4BP68371 445 aa17■□□□□ 0.31
CHD4-201ENST00000357008 AOPEPQ8N6M6 819 aa17■□□□□ 0.31
CHD4-201ENST00000357008 MCM6Q14566 821 aa17■□□□□ 0.31
CHD4-201ENST00000357008 MEIS3Q99687 375 aa17■□□□□ 0.31
CHD4-201ENST00000357008 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
CHD4-201ENST00000357008 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
CHD4-201ENST00000357008 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
CHD4-201ENST00000357008 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
CHD4-201ENST00000357008 MYO1BO43795 1136 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 SYT1P21579 422 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 HSPA4P34932 840 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 TYRO3Q06418 890 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
CHD4-201ENST00000357008 CTNNA2P26232 953 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 RRAGBQ5VZM2 374 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 STXBP4Q6ZWJ1 553 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
CHD4-201ENST00000357008 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 RSPH14Q9UHP6 348 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 OPA1O60313 960 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 KIAA0753Q2KHM9 967 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 LDHAL6AQ6ZMR3 332 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 EXOC1Q9NV70 894 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
CHD4-201ENST00000357008 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 ZFYP08048 801 aaPredicted RBP16.98■□□□□ 0.31
CHD4-201ENST00000357008 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
CHD4-201ENST00000357008 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 CCDC155Q8N6L0 562 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 PDE4BQ07343 736 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
CHD4-201ENST00000357008 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 ZBTB43O43298 467 aa16.97■□□□□ 0.31
CHD4-201ENST00000357008 CTAGE9A4FU28 777 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 CCDC172P0C7W6 258 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 INTS4Q96HW7 963 aaKnown RBP16.96■□□□□ 0.31
CHD4-201ENST00000357008 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 ATP8B2P98198 1209 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 C6orf163Q5TEZ5 329 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 SPTY2D1Q68D10 685 aaPredicted RBP16.96■□□□□ 0.31
CHD4-201ENST00000357008 TMTC2Q8N394 836 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 TSPY2A6NKD2 308 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 DDX12PQ92771 950 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 ANKIB1Q9P2G1 1089 aa16.96■□□□□ 0.31
CHD4-201ENST00000357008 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.3
CHD4-201ENST00000357008 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 PRC1O43663 620 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 WTAPQ15007 396 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 C14orf93Q9H972 538 aaKnown RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 TACC1O75410 805 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 KRT23Q9C075 422 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 ZBTB3Q9H5J0 574 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 AFMP43652 599 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 UQCRFS1P1P0C7P4 283 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 CAPN2P17655 700 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 GTF2A1P52655 376 aaPredicted RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 Q6ZUG5 572 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
CHD4-201ENST00000357008 NSRP1Q9H0G5 558 aaKnown RBP16.95■□□□□ 0.3
CHD4-201ENST00000357008 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 FEZ1Q99689 392 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
CHD4-201ENST00000357008 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 SPAG5Q96R06 1193 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 SELENOOQ9BVL4 669 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 PHF8Q9UPP1 1060 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 KRT83P78385 493 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
CHD4-201ENST00000357008 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
CHD4-201ENST00000357008 TUBBP07437 444 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 LDHCP07864 332 aa16.94■□□□□ 0.3
CHD4-201ENST00000357008 SPTLC2O15270 562 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 PTGS1P23219 599 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 PSMA7O14818 248 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 ZPR1O75312 459 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 LMOD1P29536 600 aaPredicted RBP16.93■□□□□ 0.3
CHD4-201ENST00000357008 STAT6P42226 847 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 HOMER2Q9NSB8 354 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 ATRIPQ8WXE1 791 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 CNNM2Q9H8M5 875 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
CHD4-201ENST00000357008 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
CHD4-201ENST00000357008 OGFRQ9NZT2 677 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms