RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
CAPN3-204ENST00000356316 MPNDQ8N594 471 aa13.81□□□□□ -0.2
CAPN3-204ENST00000356316 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
CAPN3-204ENST00000356316 MKRN1Q9UHC7 482 aaKnown RBP13.81□□□□□ -0.2
CAPN3-204ENST00000356316 ABCC4O15439 1325 aa13.81□□□□□ -0.2
CAPN3-204ENST00000356316 TMEM88BA6NKF7 163 aa13.8□□□□□ -0.2
CAPN3-204ENST00000356316 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
CAPN3-204ENST00000356316 RIC3Q7Z5B4 369 aa13.8□□□□□ -0.2
CAPN3-204ENST00000356316 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
CAPN3-204ENST00000356316 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
CAPN3-204ENST00000356316 ATP5J2-PTCD1G3V325 749 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-204ENST00000356316 HSP90B1P14625 803 aaKnown RBP13.79□□□□□ -0.2
CAPN3-204ENST00000356316 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 GRAPQ13588 217 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 AOC3Q16853 763 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 GRAPLQ8TC17 118 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-204ENST00000356316 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 PASKQ96RG2 1323 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
CAPN3-204ENST00000356316 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 HSPA1AP0DMV8 641 aaKnown RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 HSPA1BP0DMV9 641 aaKnown RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 RTFDC1Q9BY42 306 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-204ENST00000356316 LAMB2P55268 1798 aa13.78□□□□□ -0.2
CAPN3-204ENST00000356316 ZNF853P0CG23 659 aa13.77□□□□□ -0.21
CAPN3-204ENST00000356316 TNIP1Q15025 636 aa13.77□□□□□ -0.21
CAPN3-204ENST00000356316 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.21
CAPN3-204ENST00000356316 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
CAPN3-204ENST00000356316 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
CAPN3-204ENST00000356316 EPS15P42566 896 aa13.76□□□□□ -0.21
CAPN3-204ENST00000356316 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
CAPN3-204ENST00000356316 RTL5Q5HYW3 569 aaPredicted RBP13.76□□□□□ -0.21
CAPN3-204ENST00000356316 BCL2L13Q9BXK5 485 aa13.76□□□□□ -0.21
CAPN3-204ENST00000356316 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-204ENST00000356316 SCNN1DP51172 638 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 CXCL9Q07325 125 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
CAPN3-204ENST00000356316 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 CIAPIN1Q6FI81 312 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 SLC51AQ86UW1 340 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
CAPN3-204ENST00000356316 GPRC5DQ9NZD1 345 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 ABT1Q9ULW3 272 aaKnown RBP13.75□□□□□ -0.21
CAPN3-204ENST00000356316 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
CAPN3-204ENST00000356316 COL4A5P29400 1685 aa13.75□□□□□ -0.21
CAPN3-204ENST00000356316 TAF1P21675 1872 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-204ENST00000356316 WASHC4Q2M389 1173 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 DEFB115Q30KQ5 88 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 AIDAQ96BJ3 306 aa13.74□□□□□ -0.21
CAPN3-204ENST00000356316 PHAXQ9H814 394 aaKnown RBP13.74□□□□□ -0.21
CAPN3-204ENST00000356316 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-204ENST00000356316 RAD17O75943 681 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 VEGFBP49765 207 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 GMPSP49915 693 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-204ENST00000356316 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
CAPN3-204ENST00000356316 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-204ENST00000356316 CCDC191Q8NCU4 936 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 EYA3Q99504 573 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 MYD88Q99836 296 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
CAPN3-204ENST00000356316 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CAPN3-204ENST00000356316 G3V3G9 751 aa13.72□□□□□ -0.21
CAPN3-204ENST00000356316 H7C1D1 291 aa13.72□□□□□ -0.21
CAPN3-204ENST00000356316 RIMBP2O15034 1052 aa13.72□□□□□ -0.21
CAPN3-204ENST00000356316 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CAPN3-204ENST00000356316 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
CAPN3-204ENST00000356316 STK31Q9BXU1 1019 aa13.72□□□□□ -0.21
CAPN3-204ENST00000356316 CWC25Q9NXE8 425 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-204ENST00000356316 CCDC152Q4G0S7 254 aa13.71□□□□□ -0.21
CAPN3-204ENST00000356316 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
CAPN3-204ENST00000356316 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
CAPN3-204ENST00000356316 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 PDE8AO60658 829 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-204ENST00000356316 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-204ENST00000356316 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
CAPN3-204ENST00000356316 ANP32CO43423 234 aa13.69□□□□□ -0.22
CAPN3-204ENST00000356316 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-204ENST00000356316 ECE1P42892 770 aa13.69□□□□□ -0.22
CAPN3-204ENST00000356316 GPSM2P81274 684 aa13.69□□□□□ -0.22
CAPN3-204ENST00000356316 CCDC27Q2M243 656 aa13.69□□□□□ -0.22
CAPN3-204ENST00000356316 ZC3H15Q8WU90 426 aaKnown RBP13.69□□□□□ -0.22
CAPN3-204ENST00000356316 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
CAPN3-204ENST00000356316 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
CAPN3-204ENST00000356316 TRAF5O00463 557 aa13.68□□□□□ -0.22
CAPN3-204ENST00000356316 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms