RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
HMGN3-202ENST00000344726 TRIM28Q13263 835 aaKnown RBP18.59■□□□□ 0.57
HMGN3-202ENST00000344726 G2E3Q7L622 706 aa18.58■□□□□ 0.56
HMGN3-202ENST00000344726 MYD88Q99836 296 aa18.58■□□□□ 0.56
HMGN3-202ENST00000344726 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
HMGN3-202ENST00000344726 GRAPQ13588 217 aa18.57■□□□□ 0.56
HMGN3-202ENST00000344726 GRAPLQ8TC17 118 aaPredicted RBP18.57■□□□□ 0.56
HMGN3-202ENST00000344726 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
HMGN3-202ENST00000344726 TAF1DQ9H5J8 278 aaPredicted RBP18.57■□□□□ 0.56
HMGN3-202ENST00000344726 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 VAMP4O75379 141 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 AOC3Q16853 763 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 GRIPAP1Q4V328 841 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 DDX46Q7L014 1031 aaKnown RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 LARGE2Q8N3Y3 721 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 CELF1Q92879 486 aaKnown RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 METTL22Q9BUU2 404 aaPredicted RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 RTFDC1Q9BY42 306 aaPredicted RBP18.56■□□□□ 0.56
HMGN3-202ENST00000344726 MAP3K2Q9Y2U5 619 aa18.56■□□□□ 0.56
HMGN3-202ENST00000344726 IRS4O14654 1257 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-202ENST00000344726 BBOX1O75936 387 aa18.55■□□□□ 0.56
HMGN3-202ENST00000344726 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
HMGN3-202ENST00000344726 JARID2Q92833 1246 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-202ENST00000344726 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
HMGN3-202ENST00000344726 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
HMGN3-202ENST00000344726 PI4KAP2A4QPH2 592 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 IQCA1LA6NCM1 817 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 PPIP5K2O43314 1243 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
HMGN3-202ENST00000344726 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 KSR2Q6VAB6 950 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 GPC2Q8N158 579 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 PI4KAP1Q8N8J0 262 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
HMGN3-202ENST00000344726 MYH3P11055 1940 aa18.54■□□□□ 0.56
HMGN3-202ENST00000344726 IGKV5-2P06315 115 aa18.53■□□□□ 0.56
HMGN3-202ENST00000344726 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
HMGN3-202ENST00000344726 HACL1Q9UJ83 578 aa18.53■□□□□ 0.56
HMGN3-202ENST00000344726 EPHX2P34913 555 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 SCNN1DP51172 638 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.56
HMGN3-202ENST00000344726 MPNDQ8N594 471 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 KLRG1Q96E93 195 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 GJA3Q9Y6H8 435 aa18.52■□□□□ 0.56
HMGN3-202ENST00000344726 PCCAP05165 728 aaPredicted RBP18.51■□□□□ 0.55
HMGN3-202ENST00000344726 EIF6P56537 245 aaKnown RBP18.51■□□□□ 0.55
HMGN3-202ENST00000344726 FLIIQ13045 1269 aa18.51■□□□□ 0.55
HMGN3-202ENST00000344726 LDHDQ86WU2 507 aa18.51■□□□□ 0.55
HMGN3-202ENST00000344726 MYH16Q9H6N6 1097 aa18.51■□□□□ 0.55
HMGN3-202ENST00000344726 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
HMGN3-202ENST00000344726 CWC25Q9NXE8 425 aaPredicted RBP18.51■□□□□ 0.55
HMGN3-202ENST00000344726 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
HMGN3-202ENST00000344726 EAPPQ56P03 285 aaPredicted RBP18.5■□□□□ 0.55
HMGN3-202ENST00000344726 NIM1KQ8IY84 436 aa18.5■□□□□ 0.55
HMGN3-202ENST00000344726 PASKQ96RG2 1323 aa18.49■□□□□ 0.55
HMGN3-202ENST00000344726 PCNTO95613 3336 aa18.49■□□□□ 0.55
HMGN3-202ENST00000344726 CWF19L2Q2TBE0 894 aaKnown RBP18.49■□□□□ 0.55
HMGN3-202ENST00000344726 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
HMGN3-202ENST00000344726 VPS33BQ9H267 617 aa18.49■□□□□ 0.55
HMGN3-202ENST00000344726 YDJCA8MPS7 323 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
HMGN3-202ENST00000344726 EPS15P42566 896 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 GPSM2P81274 684 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 CXCL9Q07325 125 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 JMYQ8N9B5 988 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
HMGN3-202ENST00000344726 CCDC85AQ96PX6 553 aaPredicted RBP18.48■□□□□ 0.55
HMGN3-202ENST00000344726 SPEF2Q9C093 1822 aa18.47■□□□□ 0.55
HMGN3-202ENST00000344726 NEURL1BA8MQ27 555 aa18.47■□□□□ 0.55
HMGN3-202ENST00000344726 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
HMGN3-202ENST00000344726 GPR101Q96P66 508 aaPredicted RBP18.47■□□□□ 0.55
HMGN3-202ENST00000344726 POLLQ9UGP5 575 aa18.47■□□□□ 0.55
HMGN3-202ENST00000344726 ZNRF3Q9ULT6 936 aa18.47■□□□□ 0.55
HMGN3-202ENST00000344726 CDHR2Q9BYE9 1310 aa18.47■□□□□ 0.55
HMGN3-202ENST00000344726 PDE8AO60658 829 aa18.46■□□□□ 0.55
HMGN3-202ENST00000344726 RPS8P62241 208 aaKnown RBP18.46■□□□□ 0.55
HMGN3-202ENST00000344726 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
HMGN3-202ENST00000344726 MAP1SQ66K74 1059 aaPredicted RBP18.46■□□□□ 0.55
HMGN3-202ENST00000344726 NSFL1CQ9UNZ2 370 aaKnown RBP18.46■□□□□ 0.55
HMGN3-202ENST00000344726 DNAAF4Q8WXU2 420 aa18.45■□□□□ 0.54
HMGN3-202ENST00000344726 RAD17O75943 681 aa18.44■□□□□ 0.54
HMGN3-202ENST00000344726 PNMA8AQ86V59 439 aaPredicted RBP18.44■□□□□ 0.54
HMGN3-202ENST00000344726 CLEC11AQ9Y240 323 aa18.44■□□□□ 0.54
HMGN3-202ENST00000344726 F6X3S4 739 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 H7C1W4 665 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 LMOD1P29536 600 aaPredicted RBP18.43■□□□□ 0.54
HMGN3-202ENST00000344726 GMPSP49915 693 aaPredicted RBP18.43■□□□□ 0.54
HMGN3-202ENST00000344726 CTSWP56202 376 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 CCDC152Q4G0S7 254 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 TBC1D16Q8TBP0 767 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 CREBZFQ9NS37 354 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 GPRC5DQ9NZD1 345 aa18.43■□□□□ 0.54
HMGN3-202ENST00000344726 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms