RNA–Protein interactions for RNA: ENST00000344638.4

DEFB108F-201, Transcript of defensin beta 108F (pseudogene), humanhuman

BASIC

Gene DEFB108F, Length 222 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB108F-201ENST00000344638 ZNF408Q9H9D4 720 aa4.89□□□□□ -1.63
DEFB108F-201ENST00000344638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.89□□□□□ -1.63
DEFB108F-201ENST00000344638 MINDY4BA8MYZ0 360 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 UBAP1LF5GYI3 381 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 EREGO14944 169 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 RAB11FIP3O75154 756 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 ITGBL1O95965 494 aaPredicted RBP4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 XRCC5P13010 732 aaKnown RBP4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 HSD3B2P26439 372 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 NASPP49321 788 aaPredicted RBP4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 NFE2L2Q16236 605 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 IER5Q5VY09 327 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 PDE12Q6L8Q7 609 aaKnown RBP4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 CKAP2LQ8IYA6 745 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 C1orf127Q8N9H9 656 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 GLIS3Q8NEA6 775 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 MRFAP1L1Q96HT8 127 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 EAF1Q96JC9 268 aaPredicted RBP4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 ZFAND3Q9H8U3 227 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 MRVI1Q9Y6F6 885 aa4.88□□□□□ -1.63
DEFB108F-201ENST00000344638 KLF4O43474 513 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 MARCH6O60337 910 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 GADD45BO75293 160 aaPredicted RBP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 ZIC2O95409 532 aaPredicted RBP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 ALDH1A1P00352 501 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 SSBP05455 408 aaKnown RBP eCLIP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 PHKA2P46019 1235 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 ARSDP51689 593 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 BTLAQ7Z6A9 289 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 KIAA0825Q8IV33 1275 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 C3orf58Q8NDZ4 430 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 KCNB2Q92953 911 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 MKL1Q969V6 931 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 RNPC3Q96LT9 517 aaKnown RBP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 NOC4LQ9BVI4 516 aaKnown RBP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 SUV39H2Q9H5I1 410 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 GINM1Q9NU53 330 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 EFR3BQ9Y2G0 817 aa4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 FNDC3AQ9Y2H6 1198 aaKnown RBP4.87□□□□□ -1.63
DEFB108F-201ENST00000344638 EIF4A3P38919 411 aaKnown RBP4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 IGBP1P78318 339 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 NFX1Q12986 1120 aaKnown RBP4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 HIF1AQ16665 826 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 CTC1Q2NKJ3 1217 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 GNASQ5JWF2 1037 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 SLC27A3Q5K4L6 730 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 NBPF6Q5VWK0 638 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 ANKS3Q6ZW76 656 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 RELL1Q8IUW5 271 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 ZNF296Q8WUU4 475 aaPredicted RBP4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 NBPF4Q96M43 638 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 ZIC5Q96T25 663 aa4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 TTF2Q9UNY4 1162 aaKnown RBP4.86□□□□□ -1.63
DEFB108F-201ENST00000344638 FAM221BA6H8Z2 402 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 GARTP22102 1010 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 GTF2E1P29083 439 aaPredicted RBP4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 GBP2P32456 591 aaPredicted RBP4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 GPC1P35052 558 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 RNF144AP50876 292 aaPredicted RBP4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 WDR4P57081 412 aaKnown RBP4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 KIAA0319Q5VV43 1072 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 FBXL19Q6PCT2 694 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 MICAL1Q8TDZ2 1067 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 TMEM74Q96NL1 305 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 LATS2Q9NRM7 1088 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 SIRPGQ9P1W8 387 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 WASF2Q9Y6W5 498 aa4.85□□□□□ -1.63
DEFB108F-201ENST00000344638 hCG_2014768A0A024R1R8 64 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 A0A1W2PP55 124 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 SPATA31C2B4DYI2 1134 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 ENPP3O14638 875 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 XYLBO75191 536 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 CYP2E1P05181 493 aaPredicted RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 TIMP2P16035 220 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 ATP4AP20648 1035 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 GSTT1P30711 240 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 SOX9P48436 509 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 VEGFBP49765 207 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 RAB33AQ14088 237 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 NBPF1Q3BBV0 1214 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 PEAR1Q5VY43 1037 aaPredicted RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 LRRC69Q6ZNQ3 347 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 BICDL1Q6ZP65 573 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 HNRNPLLQ8WVV9 542 aaKnown RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 SRPK1Q96SB4 655 aaKnown RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 INSM2Q96T92 566 aaPredicted RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 KANSL2Q9H9L4 492 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 IFT57Q9NWB7 429 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 ABI2Q9NYB9 513 aaPredicted RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 ANKIB1Q9P2G1 1089 aa4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 GPC6Q9Y625 555 aaPredicted RBP4.84□□□□□ -1.63
DEFB108F-201ENST00000344638 J3QL48 77 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 GREM1O60565 184 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 FBXO24O75426 580 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 CLSTN1O94985 981 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 TATP17735 454 aaPredicted RBP4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 SLC19A1P41440 591 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 FCGRTP55899 365 aa4.83□□□□□ -1.64
DEFB108F-201ENST00000344638 FAM160A1Q05DH4 1040 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms