RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 UPF2Q9HAU5 1272 aaKnown RBP21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 ECHDC1Q9NTX5 307 aa21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 RGL2O15211 777 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 PDE8AO60658 829 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 CIAO1O76071 339 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 TNNI3KQ59H18 835 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 GREM2Q9H772 168 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 NARFQ9UHQ1 456 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 FPGT-TNNI3KV9GXZ4 949 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 SH3TC1Q8TE82 1336 aa21.02■□□□□ 0.96
FRMD4A-202ENST00000342409 COL4A1P02462 1669 aa21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 FAM177BA6PVY3 158 aa21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 MAP4K4O95819 1239 aaPredicted RBP21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 IL15P40933 162 aaPredicted RBP21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 USPL1Q5W0Q7 1092 aa21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 DBNLQ9UJU6 430 aaKnown RBP21.01■□□□□ 0.95
FRMD4A-202ENST00000342409 GLRX3O76003 335 aaKnown RBP21■□□□□ 0.95
FRMD4A-202ENST00000342409 HCLS1P14317 486 aaPredicted RBP21■□□□□ 0.95
FRMD4A-202ENST00000342409 CCDC57Q2TAC2 916 aa21■□□□□ 0.95
FRMD4A-202ENST00000342409 ARHGEF1Q92888 912 aaKnown RBP21■□□□□ 0.95
FRMD4A-202ENST00000342409 RILPL2Q969X0 211 aa21■□□□□ 0.95
FRMD4A-202ENST00000342409 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
FRMD4A-202ENST00000342409 A0A1B0GUL6 1792 aa21■□□□□ 0.95
FRMD4A-202ENST00000342409 ZNF609O15014 1411 aa21■□□□□ 0.95
FRMD4A-202ENST00000342409 RIC1Q4ADV7 1423 aa21■□□□□ 0.95
FRMD4A-202ENST00000342409 TRIM6-TRIM34B2RNG4 842 aa20.99■□□□□ 0.95
FRMD4A-202ENST00000342409 CHMLP26374 656 aa20.99■□□□□ 0.95
FRMD4A-202ENST00000342409 RBM25P49756 843 aaKnown RBP20.99■□□□□ 0.95
FRMD4A-202ENST00000342409 TBC1D9BQ66K14 1250 aa20.99■□□□□ 0.95
FRMD4A-202ENST00000342409 AK7Q96M32 723 aa20.99■□□□□ 0.95
FRMD4A-202ENST00000342409 ITGA6P23229 1130 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 RXRBP28702 533 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 PROM2Q8N271 834 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 GPR108Q9NPR9 543 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 ERC2O15083 957 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 DBNDD2Q9BQY9 259 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 FBXO3Q9UK99 471 aa20.98■□□□□ 0.95
FRMD4A-202ENST00000342409 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
FRMD4A-202ENST00000342409 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
FRMD4A-202ENST00000342409 ARAP2Q8WZ64 1704 aa20.97■□□□□ 0.95
FRMD4A-202ENST00000342409 SLC27A3Q5K4L6 730 aa20.96■□□□□ 0.95
FRMD4A-202ENST00000342409 POTEAQ6S8J7 498 aa20.96■□□□□ 0.95
FRMD4A-202ENST00000342409 DDRGK1Q96HY6 314 aa20.96■□□□□ 0.95
FRMD4A-202ENST00000342409 RIPOR2Q9Y4F9 1068 aa20.96■□□□□ 0.95
FRMD4A-202ENST00000342409 KIF2CQ99661 725 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 ESYT1Q9BSJ8 1104 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 AKAP11Q9UKA4 1901 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 ANKRD18BA2A2Z9 1011 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 USP26Q9BXU7 913 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 IL25Q9H293 177 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 RGPD3A6NKT7 1758 aaPredicted RBP20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 RGPD4Q7Z3J3 1758 aa20.95■□□□□ 0.94
FRMD4A-202ENST00000342409 ERFEQ4G0M1 354 aa20.94■□□□□ 0.94
FRMD4A-202ENST00000342409 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
FRMD4A-202ENST00000342409 CNTROBQ8N137 903 aa20.94■□□□□ 0.94
FRMD4A-202ENST00000342409 RTL9Q8NET4 1388 aa20.94■□□□□ 0.94
FRMD4A-202ENST00000342409 TNRC6CQ9HCJ0 1690 aaKnown RBP20.94■□□□□ 0.94
FRMD4A-202ENST00000342409 ZPR1O75312 459 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 PHF14O94880 888 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 ATP5JP18859 108 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 TIMM10P62072 90 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 BICDL1Q6ZP65 573 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 ABCC12Q96J65 1359 aa20.93■□□□□ 0.94
FRMD4A-202ENST00000342409 TXNRD1Q16881 649 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 TAF7LQ5H9L4 462 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 TRAPPC3LQ5T215 181 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 BOLA2Q9H3K6 86 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 SEC31BQ9NQW1 1179 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 VGLL2Q8N8G2 317 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 CEP126Q9P2H0 1117 aa20.92■□□□□ 0.94
FRMD4A-202ENST00000342409 A0A1B0GUL7 405 aa20.91■□□□□ 0.94
FRMD4A-202ENST00000342409 LDHAL6AQ6ZMR3 332 aa20.91■□□□□ 0.94
FRMD4A-202ENST00000342409 MYO5AQ9Y4I1 1855 aaKnown RBP20.91■□□□□ 0.94
FRMD4A-202ENST00000342409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 ADRA2BP18089 450 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 RFC4P35249 363 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 SLC4A3P48751 1232 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 SLC10A5Q5PT55 438 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 MYH7P12883 1935 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 PLSCR1O15162 318 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 EVI5LQ96CN4 794 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 NEUROD6Q96NK8 337 aa20.9■□□□□ 0.94
FRMD4A-202ENST00000342409 EIF5BO60841 1220 aaKnown RBP20.89■□□□□ 0.93
FRMD4A-202ENST00000342409 ADORA1P30542 326 aa20.89■□□□□ 0.93
FRMD4A-202ENST00000342409 ILDR1Q86SU0 546 aaPredicted RBP20.89■□□□□ 0.93
FRMD4A-202ENST00000342409 EDC3Q96F86 508 aaKnown RBP20.89■□□□□ 0.93
FRMD4A-202ENST00000342409 SETDB2Q96T68 719 aa20.89■□□□□ 0.93
FRMD4A-202ENST00000342409 CCDC152Q4G0S7 254 aa20.88■□□□□ 0.93
FRMD4A-202ENST00000342409 NDUFB9Q9Y6M9 179 aa20.88■□□□□ 0.93
FRMD4A-202ENST00000342409 REC8O95072 547 aa20.87■□□□□ 0.93
FRMD4A-202ENST00000342409 SF3B3Q15393 1217 aaKnown RBP20.87■□□□□ 0.93
FRMD4A-202ENST00000342409 HAUS7Q99871 368 aa20.87■□□□□ 0.93
FRMD4A-202ENST00000342409 CNNM1Q9NRU3 951 aa20.87■□□□□ 0.93
FRMD4A-202ENST00000342409 SGSM2O43147 1006 aa20.87■□□□□ 0.93
FRMD4A-202ENST00000342409 HSP90B1P14625 803 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms