RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 GIGYF2Q6Y7W6 1299 aaKnown RBP15.74■□□□□ 0.11
COL18A1-201ENST00000342220 MPHOSPH8Q99549 860 aa15.74■□□□□ 0.11
COL18A1-201ENST00000342220 REC8O95072 547 aa15.74■□□□□ 0.11
COL18A1-201ENST00000342220 ITGA6P23229 1130 aa15.74■□□□□ 0.11
COL18A1-201ENST00000342220 SEC31BQ9NQW1 1179 aa15.74■□□□□ 0.11
COL18A1-201ENST00000342220 USPL1Q5W0Q7 1092 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 NLRP10Q86W26 655 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 THRAP3Q9Y2W1 955 aaKnown RBP15.73■□□□□ 0.11
COL18A1-201ENST00000342220 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 CPA1P15085 419 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 FAM227BQ96M60 508 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 ZHX1Q9UKY1 873 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-201ENST00000342220 TRPC5Q9UL62 973 aaPredicted RBP15.73■□□□□ 0.11
COL18A1-201ENST00000342220 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
COL18A1-201ENST00000342220 MRE11P49959 708 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 SUSD4Q5VX71 490 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 TCEANC2Q96MN5 208 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 IL25Q9H293 177 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 JAG2Q9Y219 1238 aa15.73■□□□□ 0.11
COL18A1-201ENST00000342220 PI16Q6UXB8 463 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 LINC00116Q8NCU8 138 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 AK7Q96M32 723 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 LTBP4Q8N2S1 1624 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 TPM2P07951 284 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 GRPEL1Q9HAV7 217 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 RFC4P35249 363 aa15.72■□□□□ 0.11
COL18A1-201ENST00000342220 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
COL18A1-201ENST00000342220 KDM3BQ7LBC6 1761 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 CHMLP26374 656 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 CCDC129Q6ZRS4 1044 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 FAM196AQ6ZSG2 479 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 SSFA2P28290 1259 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 ADORA1P30542 326 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
COL18A1-201ENST00000342220 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
COL18A1-201ENST00000342220 PHLPP1O60346 1717 aa15.71■□□□□ 0.1
COL18A1-201ENST00000342220 ESPNB1AK53 854 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 BCL9O00512 1426 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 H7C1W4 665 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 FOXO4P98177 505 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 TTC39AQ5SRH9 613 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 INTS5Q6P9B9 1019 aaKnown RBP15.7■□□□□ 0.1
COL18A1-201ENST00000342220 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
COL18A1-201ENST00000342220 A0A1B0GUL7 405 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 MCCP23508 829 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 NBPF5PQ86XG9 351 aaPredicted RBP15.7■□□□□ 0.1
COL18A1-201ENST00000342220 ESYT1Q9BSJ8 1104 aa15.7■□□□□ 0.1
COL18A1-201ENST00000342220 RTCBQ9Y3I0 505 aaKnown RBP15.7■□□□□ 0.1
COL18A1-201ENST00000342220 PPFIA3O75145 1194 aa15.69■□□□□ 0.1
COL18A1-201ENST00000342220 GAS2L3Q86XJ1 694 aa15.69■□□□□ 0.1
COL18A1-201ENST00000342220 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
COL18A1-201ENST00000342220 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
COL18A1-201ENST00000342220 IL6STP40189 918 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-201ENST00000342220 UTP14AQ9BVJ6 771 aaKnown RBP15.69■□□□□ 0.1
COL18A1-201ENST00000342220 UTRNP46939 3433 aa15.69■□□□□ 0.1
COL18A1-201ENST00000342220 IFIT1P09914 478 aaKnown RBP15.69■□□□□ 0.1
COL18A1-201ENST00000342220 PRPF40BQ6NWY9 871 aaKnown RBP15.69■□□□□ 0.1
COL18A1-201ENST00000342220 ZBTB38Q8NAP3 1195 aaPredicted RBP15.69■□□□□ 0.1
COL18A1-201ENST00000342220 EYA2O00167 538 aa15.68■□□□□ 0.1
COL18A1-201ENST00000342220 BARGINQ6ZT62 677 aa15.68■□□□□ 0.1
COL18A1-201ENST00000342220 PI4K2BQ8TCG2 481 aa15.68■□□□□ 0.1
COL18A1-201ENST00000342220 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
COL18A1-201ENST00000342220 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
COL18A1-201ENST00000342220 IDH1O75874 414 aaKnown RBP15.68■□□□□ 0.1
COL18A1-201ENST00000342220 FNBP4Q8N3X1 1017 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-201ENST00000342220 SH3TC1Q8TE82 1336 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 USP26Q9BXU7 913 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 COL22A1Q8NFW1 1626 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-201ENST00000342220 PARP4Q9UKK3 1724 aaKnown RBP15.67■□□□□ 0.1
COL18A1-201ENST00000342220 NMIQ13287 307 aaPredicted RBP15.67■□□□□ 0.1
COL18A1-201ENST00000342220 KRT27Q7Z3Y8 459 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 SETDB2Q96T68 719 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 AK9Q5TCS8 1911 aa15.67■□□□□ 0.1
COL18A1-201ENST00000342220 ERBB4Q15303 1308 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 APPP05067 770 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
COL18A1-201ENST00000342220 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 EIF5P55010 431 aaKnown RBP15.66■□□□□ 0.1
COL18A1-201ENST00000342220 ERFEQ4G0M1 354 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 VPS37DQ86XT2 251 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 PRDM10Q9NQV6 1147 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 ZNF652Q9Y2D9 606 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
COL18A1-201ENST00000342220 APBA3O96018 575 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 RABEP1Q15276 862 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 CCDC158Q5M9N0 1113 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 TTLL11Q8NHH1 800 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 TFCP2L1Q9NZI6 479 aa15.66■□□□□ 0.1
COL18A1-201ENST00000342220 CTSWP56202 376 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 SKOR2Q2VWA4 1001 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-201ENST00000342220 ABCF2Q9UG63 623 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 SPATA31A6Q5VVP1 1343 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 PCCAP05165 728 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms