RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 ANKRD1Q15327 319 aa23.69■■□□□ 1.38
UBC-201ENST00000339647 GTF3C6Q969F1 213 aa23.69■■□□□ 1.38
UBC-201ENST00000339647 USP31Q70CQ4 1352 aa23.69■■□□□ 1.38
UBC-201ENST00000339647 CDK11BP21127 795 aaKnown RBP23.69■■□□□ 1.38
UBC-201ENST00000339647 STX1AQ16623 288 aa23.69■■□□□ 1.38
UBC-201ENST00000339647 DHX40Q8IX18 779 aaKnown RBP23.69■■□□□ 1.38
UBC-201ENST00000339647 IGSF1Q8N6C5 1336 aa23.68■■□□□ 1.38
UBC-201ENST00000339647 A0A0D9SFI3 127 aa23.68■■□□□ 1.38
UBC-201ENST00000339647 HTATSF1O43719 755 aaKnown RBP23.68■■□□□ 1.38
UBC-201ENST00000339647 FBXW7Q969H0 707 aa23.68■■□□□ 1.38
UBC-201ENST00000339647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.68■■□□□ 1.38
UBC-201ENST00000339647 ANXA1P04083 346 aa23.68■■□□□ 1.38
UBC-201ENST00000339647 AACSQ86V21 672 aa23.68■■□□□ 1.38
UBC-201ENST00000339647 ERCC4Q92889 916 aaPredicted RBP23.68■■□□□ 1.38
UBC-201ENST00000339647 FTOQ9C0B1 505 aaKnown RBP eCLIP23.68■■□□□ 1.38
UBC-201ENST00000339647 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
UBC-201ENST00000339647 AMPHP49418 695 aa23.67■■□□□ 1.38
UBC-201ENST00000339647 DNAAF4Q8WXU2 420 aa23.67■■□□□ 1.38
UBC-201ENST00000339647 GPATCH3Q96I76 525 aa23.67■■□□□ 1.38
UBC-201ENST00000339647 NOL10Q9BSC4 688 aaKnown RBP23.67■■□□□ 1.38
UBC-201ENST00000339647 GOLPH3LQ9H4A5 285 aa23.67■■□□□ 1.38
UBC-201ENST00000339647 CCAR1Q8IX12 1150 aaKnown RBP23.67■■□□□ 1.38
UBC-201ENST00000339647 NPHP4O75161 1426 aaPredicted RBP23.66■■□□□ 1.38
UBC-201ENST00000339647 H2AFXP16104 143 aaPredicted RBP23.66■■□□□ 1.38
UBC-201ENST00000339647 NRXN3Q9Y4C0 1643 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 H3BQV1 296 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
UBC-201ENST00000339647 MAPK8IP2Q13387 824 aaPredicted RBP23.66■■□□□ 1.38
UBC-201ENST00000339647 IFFO2Q5TF58 517 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 TRERF1Q96PN7 1200 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 CALCOCO1Q9P1Z2 691 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 CHPF2Q9P2E5 772 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 FHOD1Q9Y613 1164 aa23.66■■□□□ 1.38
UBC-201ENST00000339647 USP6P35125 1406 aa23.65■■□□□ 1.38
UBC-201ENST00000339647 FOSBP53539 338 aa23.65■■□□□ 1.38
UBC-201ENST00000339647 SNW1Q13573 536 aaKnown RBP23.65■■□□□ 1.38
UBC-201ENST00000339647 BMS1Q14692 1282 aaKnown RBP23.65■■□□□ 1.38
UBC-201ENST00000339647 FLT4P35916 1363 aa23.65■■□□□ 1.38
UBC-201ENST00000339647 RNF20Q5VTR2 975 aa23.65■■□□□ 1.38
UBC-201ENST00000339647 E4F1Q66K89 784 aaPredicted RBP23.65■■□□□ 1.38
UBC-201ENST00000339647 AOPEPQ8N6M6 819 aa23.65■■□□□ 1.38
UBC-201ENST00000339647 CAPN2P17655 700 aa23.64■■□□□ 1.38
UBC-201ENST00000339647 CLCN6P51797 869 aa23.64■■□□□ 1.38
UBC-201ENST00000339647 SYT10Q6XYQ8 523 aa23.64■■□□□ 1.38
UBC-201ENST00000339647 CCDC8Q9H0W5 538 aaPredicted RBP23.64■■□□□ 1.38
UBC-201ENST00000339647 NBPF11Q86T75 865 aa23.64■■□□□ 1.37
UBC-201ENST00000339647 ZNF589Q86UQ0 364 aaPredicted RBP23.64■■□□□ 1.37
UBC-201ENST00000339647 NAP1L2Q9ULW6 460 aaPredicted RBP23.64■■□□□ 1.37
UBC-201ENST00000339647 LRRC37A3O60309 1634 aa23.64■■□□□ 1.37
UBC-201ENST00000339647 SBNO1A3KN83 1393 aa23.63■■□□□ 1.37
UBC-201ENST00000339647 ALDH8A1Q9H2A2 487 aaPredicted RBP23.63■■□□□ 1.37
UBC-201ENST00000339647 CFAP45Q9UL16 551 aa23.63■■□□□ 1.37
UBC-201ENST00000339647 CYP2C19P33261 490 aa23.63■■□□□ 1.37
UBC-201ENST00000339647 BOLA2Q9H3K6 86 aa23.63■■□□□ 1.37
UBC-201ENST00000339647 L2HGDHQ9H9P8 463 aa23.63■■□□□ 1.37
UBC-201ENST00000339647 ADD1P35611 737 aaKnown RBP23.62■■□□□ 1.37
UBC-201ENST00000339647 KCND1Q9NSA2 647 aa23.62■■□□□ 1.37
UBC-201ENST00000339647 NALCNQ8IZF0 1738 aa23.62■■□□□ 1.37
UBC-201ENST00000339647 PLEKHG3A1L390 1219 aa23.62■■□□□ 1.37
UBC-201ENST00000339647 EAF2Q96CJ1 260 aaPredicted RBP23.62■■□□□ 1.37
UBC-201ENST00000339647 PPP1R13BQ96KQ4 1090 aa23.62■■□□□ 1.37
UBC-201ENST00000339647 FSD1Q9BTV5 496 aa23.62■■□□□ 1.37
UBC-201ENST00000339647 TLR7Q9NYK1 1049 aaKnown RBP23.62■■□□□ 1.37
UBC-201ENST00000339647 CTAGE5O15320 804 aa23.61■■□□□ 1.37
UBC-201ENST00000339647 HNRNPH2P55795 449 aaKnown RBP23.61■■□□□ 1.37
UBC-201ENST00000339647 PLA2G4AP47712 749 aa23.61■■□□□ 1.37
UBC-201ENST00000339647 PDE4CQ08493 712 aa23.61■■□□□ 1.37
UBC-201ENST00000339647 KIF2AO00139 706 aaPredicted RBP23.6■■□□□ 1.37
UBC-201ENST00000339647 HIP1O00291 1037 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 TULP2O00295 520 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 ANO10Q9NW15 660 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 ROBO2Q9HCK4 1378 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 FMN2Q9NZ56 1722 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 PNMA6AP0CW24 399 aaPredicted RBP23.6■■□□□ 1.37
UBC-201ENST00000339647 MTX1Q13505 466 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 CCDC93Q567U6 631 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 ZSCAN16Q9H4T2 348 aaPredicted RBP23.6■■□□□ 1.37
UBC-201ENST00000339647 SNRKQ9NRH2 765 aa23.6■■□□□ 1.37
UBC-201ENST00000339647 ARHGAP29Q52LW3 1261 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 SASH1O94885 1247 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
UBC-201ENST00000339647 GSDMDP57764 484 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 GORABQ5T7V8 394 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 RCOR1Q9UKL0 485 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 AGLP35573 1532 aa23.59■■□□□ 1.37
UBC-201ENST00000339647 KINO60870 393 aaKnown RBP23.58■■□□□ 1.37
UBC-201ENST00000339647 ARMCX5Q6P1M9 558 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 CCDC73Q6ZRK6 1079 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 LRRC2Q9BYS8 371 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 OSBPL5Q9H0X9 879 aaPredicted RBP23.58■■□□□ 1.37
UBC-201ENST00000339647 FAM193AP78312 1265 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 Q6ZUG5 572 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 CEP57L1Q8IYX8 460 aa23.58■■□□□ 1.37
UBC-201ENST00000339647 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
UBC-201ENST00000339647 C9orf78Q9NZ63 289 aaPredicted RBP23.58■■□□□ 1.37
UBC-201ENST00000339647 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.58■■□□□ 1.374e-13■□□□□ 11.1
UBC-201ENST00000339647 KCNQ3O43525 872 aa23.57■■□□□ 1.36
UBC-201ENST00000339647 ERC1Q8IUD2 1116 aa23.57■■□□□ 1.36
UBC-201ENST00000339647 ENGASEQ8NFI3 743 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms