RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 CXCL9Q07325 125 aa17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 G2E3Q7L622 706 aa17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 NIM1KQ8IY84 436 aa17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 ANKRD36CQ5JPF3 1778 aa17.29■□□□□ 0.36
NUDCD3-201ENST00000338427 SCNN1DP51172 638 aa17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 RTFDC1Q9BY42 306 aaPredicted RBP17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 COL4A1P02462 1669 aa17.28■□□□□ 0.36
NUDCD3-201ENST00000338427 CCDC30Q5VVM6 783 aa17.27■□□□□ 0.36
NUDCD3-201ENST00000338427 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
NUDCD3-201ENST00000338427 GPR101Q96P66 508 aaPredicted RBP17.27■□□□□ 0.36
NUDCD3-201ENST00000338427 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 ANP32CO43423 234 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 RAD17O75943 681 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 GPSM2P81274 684 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 SCN4AP35499 1836 aa17.26■□□□□ 0.35
NUDCD3-201ENST00000338427 SHTN1A0MZ66 631 aa17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 PCNTO95613 3336 aa17.25■□□□□ 0.35
NUDCD3-201ENST00000338427 LTBP1Q14766 1721 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 IGKV5-2P06315 115 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 COL13A1Q5TAT6 717 aaPredicted RBP17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 SUPT20HQ8NEM7 779 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
NUDCD3-201ENST00000338427 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 GMPSP49915 693 aaPredicted RBP17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 TWISTNBQ3B726 338 aaPredicted RBP17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
NUDCD3-201ENST00000338427 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 C6orf229H3BNL8 230 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 KSR2Q6VAB6 950 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
NUDCD3-201ENST00000338427 TMEM88BA6NKF7 163 aa17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 TRAF5O00463 557 aa17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 HSPA1AP0DMV8 641 aaKnown RBP17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 HSPA1BP0DMV9 641 aaKnown RBP17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
NUDCD3-201ENST00000338427 PDE8AO60658 829 aa17.2■□□□□ 0.34
NUDCD3-201ENST00000338427 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
NUDCD3-201ENST00000338427 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
NUDCD3-201ENST00000338427 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
NUDCD3-201ENST00000338427 VAMP4O75379 141 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 VEGFBP49765 207 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 DLK2Q6UY11 383 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
NUDCD3-201ENST00000338427 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 TRPM4Q8TD43 1214 aa17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 DUOX1Q9NRD9 1551 aa17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 FANCIQ9NVI1 1328 aa17.18■□□□□ 0.34
NUDCD3-201ENST00000338427 PSMD14O00487 310 aa17.17■□□□□ 0.34
NUDCD3-201ENST00000338427 TNIP1Q15025 636 aa17.17■□□□□ 0.34
NUDCD3-201ENST00000338427 CST9Q5W186 159 aa17.17■□□□□ 0.34
NUDCD3-201ENST00000338427 IL16Q14005 1332 aa17.17■□□□□ 0.34
NUDCD3-201ENST00000338427 NEURL1BA8MQ27 555 aa17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 DEFB115Q30KQ5 88 aa17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
NUDCD3-201ENST00000338427 TTLL11Q8NHH1 800 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms