RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 CXCL9Q07325 125 aa31.78■■■□□ 2.68
CDKN3-202ENST00000335183 GRAPQ13588 217 aa31.78■■■□□ 2.68
CDKN3-202ENST00000335183 GRAPLQ8TC17 118 aaPredicted RBP31.78■■■□□ 2.68
CDKN3-202ENST00000335183 CTCFP49711 727 aaPredicted RBP31.77■■■□□ 2.68
CDKN3-202ENST00000335183 GPRC5DQ9NZD1 345 aa31.77■■■□□ 2.68
CDKN3-202ENST00000335183 ADAMTS8Q9UP79 889 aa31.77■■■□□ 2.68
CDKN3-202ENST00000335183 PLBD2Q8NHP8 589 aa31.76■■■□□ 2.67
CDKN3-202ENST00000335183 ADARB2Q9NS39 739 aaKnown RBP31.76■■■□□ 2.67
CDKN3-202ENST00000335183 WDR33Q9C0J8 1336 aaKnown RBP31.75■■■□□ 2.67
CDKN3-202ENST00000335183 WBP1LQ9NX94 342 aa31.75■■■□□ 2.67
CDKN3-202ENST00000335183 HOXB7P09629 217 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 KIAA2012Q0VF49 1180 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 CIAPIN1Q6FI81 312 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 ANKRD13DQ6ZTN6 518 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 PAXIP1Q6ZW49 1069 aaPredicted RBP31.74■■■□□ 2.67
CDKN3-202ENST00000335183 PRDM10Q9NQV6 1147 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 DBF4Q9UBU7 674 aaPredicted RBP31.74■■■□□ 2.67
CDKN3-202ENST00000335183 LRRC37AA6NMS7 1700 aa31.74■■■□□ 2.67
CDKN3-202ENST00000335183 TRAF5O00463 557 aa31.73■■■□□ 2.67
CDKN3-202ENST00000335183 GMPSP49915 693 aaPredicted RBP31.73■■■□□ 2.67
CDKN3-202ENST00000335183 ATP5J2-PTCD1G3V325 749 aa31.72■■■□□ 2.67
CDKN3-202ENST00000335183 FAM89AQ96GI7 184 aa31.72■■■□□ 2.67
CDKN3-202ENST00000335183 BCL2L13Q9BXK5 485 aa31.72■■■□□ 2.67
CDKN3-202ENST00000335183 RAD17O75943 681 aa31.71■■■□□ 2.67
CDKN3-202ENST00000335183 DUSP27Q5VZP5 1158 aa31.71■■■□□ 2.67
CDKN3-202ENST00000335183 CFAP44Q96MT7 982 aa31.71■■■□□ 2.67
CDKN3-202ENST00000335183 DUOX1Q9NRD9 1551 aa31.71■■■□□ 2.67
CDKN3-202ENST00000335183 LBX1P52954 281 aa31.7■■■□□ 2.67
CDKN3-202ENST00000335183 GRM1Q13255 1194 aa31.7■■■□□ 2.67
CDKN3-202ENST00000335183 TMC4Q7Z404 712 aa31.7■■■□□ 2.67
CDKN3-202ENST00000335183 ISCA1Q9BUE6 129 aa31.7■■■□□ 2.67
CDKN3-202ENST00000335183 TNIP1Q15025 636 aa31.69■■■□□ 2.66
CDKN3-202ENST00000335183 RTL5Q5HYW3 569 aaPredicted RBP31.69■■■□□ 2.66
CDKN3-202ENST00000335183 MBIPQ9NS73 344 aa31.69■■■□□ 2.66
CDKN3-202ENST00000335183 HYPKQ9NX55 129 aa31.69■■■□□ 2.66
CDKN3-202ENST00000335183 MAP2K1Q02750 393 aaPredicted RBP31.68■■■□□ 2.66
CDKN3-202ENST00000335183 CST9Q5W186 159 aa31.68■■■□□ 2.66
CDKN3-202ENST00000335183 CELF1Q92879 486 aaKnown RBP31.67■■■□□ 2.66
CDKN3-202ENST00000335183 CAPNS2Q96L46 248 aa31.67■■■□□ 2.66
CDKN3-202ENST00000335183 ECE1P42892 770 aa31.66■■■□□ 2.66
CDKN3-202ENST00000335183 CYP4F22Q6NT55 531 aa31.66■■■□□ 2.66
CDKN3-202ENST00000335183 NSFL1CQ9UNZ2 370 aaKnown RBP31.66■■■□□ 2.66
CDKN3-202ENST00000335183 THSD7BQ9C0I4 1608 aa31.66■■■□□ 2.66
CDKN3-202ENST00000335183 CDHR2Q9BYE9 1310 aa31.66■■■□□ 2.66
CDKN3-202ENST00000335183 YDJCA8MPS7 323 aa31.65■■■□□ 2.66
CDKN3-202ENST00000335183 SF3B3Q15393 1217 aaKnown RBP31.65■■■□□ 2.66
CDKN3-202ENST00000335183 COL4A1P02462 1669 aa31.64■■■□□ 2.66
CDKN3-202ENST00000335183 GLIS2Q9BZE0 524 aaPredicted RBP31.64■■■□□ 2.66
CDKN3-202ENST00000335183 TLL2Q9Y6L7 1015 aa31.64■■■□□ 2.66
CDKN3-202ENST00000335183 HSPA8P11142 646 aaKnown RBP31.63■■■□□ 2.65
CDKN3-202ENST00000335183 WASHC4Q2M389 1173 aa31.63■■■□□ 2.65
CDKN3-202ENST00000335183 RIC3Q7Z5B4 369 aa31.63■■■□□ 2.65
CDKN3-202ENST00000335183 IRS4O14654 1257 aaPredicted RBP31.62■■■□□ 2.65
CDKN3-202ENST00000335183 CELF2O95319 508 aaKnown RBP31.62■■■□□ 2.65
CDKN3-202ENST00000335183 TRPM4Q8TD43 1214 aa31.62■■■□□ 2.65
CDKN3-202ENST00000335183 PRKRIP1Q9H875 184 aaPredicted RBP31.62■■■□□ 2.65
CDKN3-202ENST00000335183 CNOT7Q9UIV1 285 aaKnown RBP31.62■■■□□ 2.65
CDKN3-202ENST00000335183 SHTN1A0MZ66 631 aa31.61■■■□□ 2.65
CDKN3-202ENST00000335183 C6orf229H3BNL8 230 aa31.61■■■□□ 2.65
CDKN3-202ENST00000335183 RIMBP2O15034 1052 aa31.61■■■□□ 2.65
CDKN3-202ENST00000335183 HIRAP54198 1017 aaPredicted RBP31.61■■■□□ 2.65
CDKN3-202ENST00000335183 GOLGA2Q08379 1002 aa31.61■■■□□ 2.65
CDKN3-202ENST00000335183 GPR101Q96P66 508 aaPredicted RBP31.61■■■□□ 2.65
CDKN3-202ENST00000335183 DBNDD1Q9H9R9 158 aa31.61■■■□□ 2.65
CDKN3-202ENST00000335183 ELL2O00472 640 aaPredicted RBP31.6■■■□□ 2.65
CDKN3-202ENST00000335183 APAF1O14727 1248 aa31.6■■■□□ 2.65
CDKN3-202ENST00000335183 ZNF408Q9H9D4 720 aa31.6■■■□□ 2.65
CDKN3-202ENST00000335183 H7C1D1 291 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 ZNF853P0CG23 659 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 GPSM2P81274 684 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 MICALL2Q8IY33 904 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 BEGAINQ9BUH8 593 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 PHAXQ9H814 394 aaKnown RBP31.59■■■□□ 2.65
CDKN3-202ENST00000335183 PGAP2Q9UHJ9 254 aa31.59■■■□□ 2.65
CDKN3-202ENST00000335183 ZBTB12Q9Y330 459 aaPredicted RBP31.59■■■□□ 2.65
CDKN3-202ENST00000335183 GNAI1P63096 354 aa31.58■■■□□ 2.65
CDKN3-202ENST00000335183 TRIM28Q13263 835 aaKnown RBP31.58■■■□□ 2.65
CDKN3-202ENST00000335183 ZC3H15Q8WU90 426 aaKnown RBP31.58■■■□□ 2.65
CDKN3-202ENST00000335183 IFT57Q9NWB7 429 aa31.58■■■□□ 2.65
CDKN3-202ENST00000335183 POLLQ9UGP5 575 aa31.58■■■□□ 2.65
CDKN3-202ENST00000335183 PSMD14O00487 310 aa31.57■■■□□ 2.64
CDKN3-202ENST00000335183 POLR2AP24928 1970 aaKnown RBP31.56■■■□□ 2.64
CDKN3-202ENST00000335183 CALD1Q05682 793 aaKnown RBP31.56■■■□□ 2.64
CDKN3-202ENST00000335183 CDC37L1Q7L3B6 337 aa31.56■■■□□ 2.64
CDKN3-202ENST00000335183 SAPCD2Q86UD0 394 aa31.56■■■□□ 2.64
CDKN3-202ENST00000335183 EYA3Q99504 573 aa31.56■■■□□ 2.64
CDKN3-202ENST00000335183 MYD88Q99836 296 aa31.56■■■□□ 2.64
CDKN3-202ENST00000335183 AOC2O75106 756 aa31.55■■■□□ 2.64
CDKN3-202ENST00000335183 RPS8P62241 208 aaKnown RBP31.55■■■□□ 2.64
CDKN3-202ENST00000335183 ZBTB38Q8NAP3 1195 aaPredicted RBP31.55■■■□□ 2.64
CDKN3-202ENST00000335183 ECE2O60344 883 aa31.54■■■□□ 2.64
CDKN3-202ENST00000335183 DOK7Q18PE1 504 aa31.54■■■□□ 2.64
CDKN3-202ENST00000335183 SAMD7Q7Z3H4 446 aa31.53■■■□□ 2.64
CDKN3-202ENST00000335183 TBC1D16Q8TBP0 767 aa31.52■■■□□ 2.64
CDKN3-202ENST00000335183 DPF2Q92785 391 aa31.52■■■□□ 2.64
CDKN3-202ENST00000335183 SEC31BQ9NQW1 1179 aa31.52■■■□□ 2.64
CDKN3-202ENST00000335183 SCN9AQ15858 1988 aa31.51■■■□□ 2.63
CDKN3-202ENST00000335183 HSP90B1P14625 803 aaKnown RBP31.51■■■□□ 2.63
CDKN3-202ENST00000335183 MAP2K2P36507 400 aa31.51■■■□□ 2.63
CDKN3-202ENST00000335183 USP48Q86UV5 1035 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms