RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 MROH5Q6ZUA9 1318 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 TRPM3Q9HCF6 1732 aaPredicted RBP7.14□□□□□ -1.27
SEC22A-201ENST00000309934 ALS2Q96Q42 1657 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 RFC4P35249 363 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 COPRSQ9NQ92 184 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 PHF14O94880 888 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 SART3Q15020 963 aaKnown RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 RC3H1Q5TC82 1133 aaKnown RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 G2E3Q7L622 706 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 SNX21Q969T3 373 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 SETDB2Q96T68 719 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 PHAXQ9H814 394 aaKnown RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 PEAK1Q9H792 1746 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 ABCC12Q96J65 1359 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 WASHC4Q2M389 1173 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 ZBTB38Q8NAP3 1195 aaPredicted RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 TBC1D32Q96NH3 1257 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 USP44Q9H0E7 712 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 CCDC66A2RUB6 948 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 SLC27A3Q5K4L6 730 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 RALYLQ86SE5 291 aaKnown RBP7.13□□□□□ -1.27
SEC22A-201ENST00000309934 NLRP3Q96P20 1036 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 CYP46A1Q9Y6A2 500 aa7.13□□□□□ -1.27
SEC22A-201ENST00000309934 ERICH2A1L162 156 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 EYA2O00167 538 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 POLA2Q14181 598 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 DDX46Q7L014 1031 aaKnown RBP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 PLEKHM2Q8IWE5 1019 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 ZNF287Q9HBT7 754 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 UTYO14607 1347 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 PRIM1P49642 420 aaKnown RBP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 KRT24Q2M2I5 525 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 PPP4R3BQ5MIZ7 849 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 LDHCP07864 332 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 GSTO1P78417 241 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 ANKRD18AQ8IVF6 992 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 RGPD8O14715 1765 aaPredicted RBP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 CACNA1FO60840 1977 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 K7ELQ4 463 aaPredicted RBP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 GNAT2P19087 354 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 CCDC178Q5BJE1 867 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 TRAPPC3LQ5T215 181 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 LDHAL6AQ6ZMR3 332 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 PLA2G12BQ9BX93 195 aa7.12□□□□□ -1.27
SEC22A-201ENST00000309934 ZBTB12Q9Y330 459 aaPredicted RBP7.12□□□□□ -1.27
SEC22A-201ENST00000309934 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 GOLGA6L4A6NEF3 574 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 IRS4O14654 1257 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 SIK1P57059 783 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 ZRSR1Q15695 479 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 LMBR1LQ6UX01 489 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 DNAJC10Q8IXB1 793 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 CCNL1Q9UK58 526 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 MEGF6O75095 1541 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 MRC1P22897 1456 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 TNNT1P13805 278 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 RPGRQ92834 1020 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 HELLSQ9NRZ9 838 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 ISY1Q9ULR0 285 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 RBM25P49756 843 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 TBC1D9Q6ZT07 1266 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 NBPF5PQ86XG9 351 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 DNAJC2Q99543 621 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 RNF41Q9H4P4 317 aaPredicted RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 BICC1Q9H694 974 aaKnown RBP7.11□□□□□ -1.27
SEC22A-201ENST00000309934 NHSL1Q5SYE7 1610 aa7.11□□□□□ -1.27
SEC22A-201ENST00000309934 CDKL5O76039 1030 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 ARID4AP29374 1257 aaPredicted RBP7.1□□□□□ -1.27
SEC22A-201ENST00000309934 ATP2B3Q16720 1220 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 NIP7Q9Y221 180 aaKnown RBP eCLIP7.1□□□□□ -1.27
SEC22A-201ENST00000309934 PALLDQ8WX93 1383 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 H7C1W4 665 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 SEMA3EO15041 775 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 IMMTQ16891 758 aaKnown RBP7.1□□□□□ -1.27
SEC22A-201ENST00000309934 FAM98CQ17RN3 349 aaKnown RBP7.1□□□□□ -1.27
SEC22A-201ENST00000309934 C8orf34Q49A92 452 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 IL1RAPL2Q9NP60 686 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 LRRC37A3O60309 1634 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 ATP5JP18859 108 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 GRIPAP1Q4V328 841 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 BANK1Q8NDB2 785 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 PIGBQ92521 554 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 ESYT1Q9BSJ8 1104 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 SIL1Q9H173 461 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 PHLPP1O60346 1717 aa7.1□□□□□ -1.27
SEC22A-201ENST00000309934 GOLGA6L6A8MZA4 724 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 FAM184AQ8NB25 1140 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 SMC3Q9UQE7 1217 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 ATP5J2-PTCD1G3V325 749 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 SDSP20132 328 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 PUM3Q15397 648 aaKnown RBP7.09□□□□□ -1.27
SEC22A-201ENST00000309934 BLOC1S2Q6QNY1 142 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 RBM17Q96I25 401 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms