RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
CKS1B-201ENST00000308987 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-201ENST00000308987 MYCP01106 439 aaPredicted RBP7.39□□□□□ -1.23
CKS1B-201ENST00000308987 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
CKS1B-201ENST00000308987 MAST1Q9Y2H9 1570 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 LRRC7Q96NW7 1537 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 NLRP1Q9C000 1473 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 NPHP4O75161 1426 aaPredicted RBP7.38□□□□□ -1.23
CKS1B-201ENST00000308987 MAPTP10636 758 aaKnown RBP7.38□□□□□ -1.23
CKS1B-201ENST00000308987 CD33P20138 364 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 TNP2Q05952 138 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 TMEM259Q4ZIN3 620 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 FAM182BQ5T319 152 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 NLRP8Q86W28 1048 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 ZNF592Q92610 1267 aa7.38□□□□□ -1.23
CKS1B-201ENST00000308987 AVENQ9NQS1 362 aaPredicted RBP7.38□□□□□ -1.23
CKS1B-201ENST00000308987 WASHC2CQ9Y4E1 1318 aa7.37□□□□□ -1.23
CKS1B-201ENST00000308987 STAU1O95793 577 aaKnown RBP7.37□□□□□ -1.23
CKS1B-201ENST00000308987 PCBP4P57723 403 aaKnown RBP7.37□□□□□ -1.23
CKS1B-201ENST00000308987 PRSS36Q5K4E3 855 aa7.37□□□□□ -1.23
CKS1B-201ENST00000308987 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
CKS1B-201ENST00000308987 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
CKS1B-201ENST00000308987 CCDC85AQ96PX6 553 aaPredicted RBP7.37□□□□□ -1.23
CKS1B-201ENST00000308987 EIF2AK4Q9P2K8 1649 aaKnown RBP7.37□□□□□ -1.23
CKS1B-201ENST00000308987 ERVK-7P63135 1459 aa7.36□□□□□ -1.23
CKS1B-201ENST00000308987 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
CKS1B-201ENST00000308987 PLA2G4AP47712 749 aa7.36□□□□□ -1.23
CKS1B-201ENST00000308987 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
CKS1B-201ENST00000308987 ZNF330Q9Y3S2 320 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-201ENST00000308987 SYNMO15061 1565 aa7.36□□□□□ -1.23
CKS1B-201ENST00000308987 TOM1O60784 492 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 APBA3O96018 575 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 ATP4AP20648 1035 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 TLR1Q15399 786 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 PRRT3Q5FWE3 981 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 THEMISQ8N1K5 641 aaPredicted RBP7.35□□□□□ -1.23
CKS1B-201ENST00000308987 ETNK1Q9HBU6 452 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 CROCC2H7BZ55 1655 aa7.35□□□□□ -1.23
CKS1B-201ENST00000308987 PIK3C2BO00750 1634 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 MYO5BQ9ULV0 1848 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 SPDYE3A6NKU9 549 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 KHNYNO15037 678 aaKnown RBP7.34□□□□□ -1.23
CKS1B-201ENST00000308987 LTKP29376 864 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 ZNF468Q5VIY5 522 aaPredicted RBP7.34□□□□□ -1.23
CKS1B-201ENST00000308987 C1orf216Q8TAB5 229 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 AIDAQ96BJ3 306 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 CEP126Q9P2H0 1117 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 RGS17Q9UGC6 210 aaPredicted RBP7.34□□□□□ -1.23
CKS1B-201ENST00000308987 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 LRRC9Q6ZRR7 1453 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 ARHGAP23Q9P227 1491 aa7.34□□□□□ -1.23
CKS1B-201ENST00000308987 SRCAPQ6ZRS2 3230 aa7.33□□□□□ -1.24
CKS1B-201ENST00000308987 SLIT1O75093 1534 aa7.33□□□□□ -1.24
CKS1B-201ENST00000308987 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
CKS1B-201ENST00000308987 A0A1W2PNR3 127 aa7.33□□□□□ -1.24
CKS1B-201ENST00000308987 KANK4Q5T7N3 995 aaPredicted RBP7.33□□□□□ -1.24
CKS1B-201ENST00000308987 SCAF11Q99590 1463 aaKnown RBP7.32□□□□□ -1.24
CKS1B-201ENST00000308987 TSGA10IPQ3SY00 556 aa7.32□□□□□ -1.24
CKS1B-201ENST00000308987 PCMTD1Q96MG8 357 aaPredicted RBP7.32□□□□□ -1.24
CKS1B-201ENST00000308987 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
CKS1B-201ENST00000308987 PRDM15P57071 1507 aaPredicted RBP7.32□□□□□ -1.24
CKS1B-201ENST00000308987 ELOA3CA0A087WX78 387 aaPredicted RBP7.31□□□□□ -1.24
CKS1B-201ENST00000308987 ELOA3DA6NLF2 546 aaPredicted RBP7.31□□□□□ -1.24
CKS1B-201ENST00000308987 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
CKS1B-201ENST00000308987 ELOA3BQ3SY89 546 aa7.31□□□□□ -1.24
CKS1B-201ENST00000308987 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
CKS1B-201ENST00000308987 ELOA3Q8NG57 546 aa7.31□□□□□ -1.24
CKS1B-201ENST00000308987 DUOX2Q9NRD8 1548 aa7.31□□□□□ -1.24
CKS1B-201ENST00000308987 VPS8Q8N3P4 1428 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 HYAL3O43820 417 aaPredicted RBP7.3□□□□□ -1.24
CKS1B-201ENST00000308987 TSPY4P0CV99 314 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 TSPY10P0CW01 314 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 ALAS2P22557 587 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 USP4Q13107 963 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 LRP8Q14114 963 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 NIFKQ9BYG3 293 aaKnown RBP7.3□□□□□ -1.24
CKS1B-201ENST00000308987 STRN4Q9NRL3 753 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 TET3O43151 1660 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 KDM5AP29375 1690 aaKnown RBP7.3□□□□□ -1.24
CKS1B-201ENST00000308987 ROBO1Q9Y6N7 1651 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 MAP3K1Q13233 1512 aa7.3□□□□□ -1.24
CKS1B-201ENST00000308987 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
CKS1B-201ENST00000308987 ABCC5O15440 1437 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 ARHGAP31Q2M1Z3 1444 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 MYOM3Q5VTT5 1437 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 GPR37L1O60883 481 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 TRIM28Q13263 835 aaKnown RBP7.29□□□□□ -1.24
CKS1B-201ENST00000308987 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
CKS1B-201ENST00000308987 MDFIQ99750 246 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 PTPN23Q9H3S7 1636 aa7.29□□□□□ -1.24
CKS1B-201ENST00000308987 CHD2O14647 1828 aaKnown RBP7.29□□□□□ -1.24
CKS1B-201ENST00000308987 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
CKS1B-201ENST00000308987 GRIK4Q16099 956 aa7.28□□□□□ -1.24
CKS1B-201ENST00000308987 TXNDC2Q86VQ3 553 aa7.28□□□□□ -1.24
CKS1B-201ENST00000308987 NACC1Q96RE7 527 aa7.28□□□□□ -1.24
CKS1B-201ENST00000308987 ZIC5Q96T25 663 aa7.28□□□□□ -1.24
CKS1B-201ENST00000308987 POTEAQ6S8J7 498 aa7.27□□□□□ -1.25
CKS1B-201ENST00000308987 SYT9Q86SS6 491 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms