RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 HIP1O00291 1037 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
RAB40A-201ENST00000304236 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
RAB40A-201ENST00000304236 CAVIN1Q6NZI2 390 aaKnown RBP17.09■□□□□ 0.33
RAB40A-201ENST00000304236 EVI5LQ96CN4 794 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
RAB40A-201ENST00000304236 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.33
RAB40A-201ENST00000304236 SIK1P57059 783 aa17.08■□□□□ 0.33
RAB40A-201ENST00000304236 PDIA6Q15084 440 aa17.08■□□□□ 0.33
RAB40A-201ENST00000304236 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.33
RAB40A-201ENST00000304236 MSL1Q68DK7 614 aa17.08■□□□□ 0.33
RAB40A-201ENST00000304236 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.33
RAB40A-201ENST00000304236 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.33
RAB40A-201ENST00000304236 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
RAB40A-201ENST00000304236 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
RAB40A-201ENST00000304236 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
RAB40A-201ENST00000304236 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
RAB40A-201ENST00000304236 ASAP1Q9ULH1 1129 aa17.08■□□□□ 0.32
RAB40A-201ENST00000304236 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
RAB40A-201ENST00000304236 CLCN1P35523 988 aa17.07■□□□□ 0.32
RAB40A-201ENST00000304236 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
RAB40A-201ENST00000304236 TTC14Q96N46 770 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 PPP1R9BQ96SB3 815 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
RAB40A-201ENST00000304236 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 AACSQ86V21 672 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
RAB40A-201ENST00000304236 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
RAB40A-201ENST00000304236 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
RAB40A-201ENST00000304236 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 AIMP1Q12904 312 aaKnown RBP17.05■□□□□ 0.32
RAB40A-201ENST00000304236 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
RAB40A-201ENST00000304236 KCNB2Q92953 911 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
RAB40A-201ENST00000304236 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
RAB40A-201ENST00000304236 PHF14O94880 888 aa17.04■□□□□ 0.32
RAB40A-201ENST00000304236 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
RAB40A-201ENST00000304236 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
RAB40A-201ENST00000304236 METTL22Q9BUU2 404 aaPredicted RBP17.04■□□□□ 0.32
RAB40A-201ENST00000304236 MRC1P22897 1456 aa17.04■□□□□ 0.32
RAB40A-201ENST00000304236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.04■□□□□ 0.32
RAB40A-201ENST00000304236 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
RAB40A-201ENST00000304236 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
RAB40A-201ENST00000304236 NEURL1BA8MQ27 555 aa17.03■□□□□ 0.32
RAB40A-201ENST00000304236 SASH1O94885 1247 aa17.03■□□□□ 0.32
RAB40A-201ENST00000304236 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
RAB40A-201ENST00000304236 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
RAB40A-201ENST00000304236 NFATC2IPQ8NCF5 419 aa17.03■□□□□ 0.32
RAB40A-201ENST00000304236 ESPNB1AK53 854 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 ITPK1Q13572 414 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 GCKRQ14397 625 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 RASEFQ8IZ41 740 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
RAB40A-201ENST00000304236 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.32
RAB40A-201ENST00000304236 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.32
RAB40A-201ENST00000304236 AK2P54819 239 aa17.02■□□□□ 0.31
RAB40A-201ENST00000304236 CABP4P57796 275 aa17.02■□□□□ 0.31
RAB40A-201ENST00000304236 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
RAB40A-201ENST00000304236 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.31
RAB40A-201ENST00000304236 SNRKQ9NRH2 765 aa17.02■□□□□ 0.31
RAB40A-201ENST00000304236 COL15A1P39059 1388 aa17.01■□□□□ 0.31
RAB40A-201ENST00000304236 GNPATO15228 680 aa17.01■□□□□ 0.31
RAB40A-201ENST00000304236 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
RAB40A-201ENST00000304236 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
RAB40A-201ENST00000304236 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
RAB40A-201ENST00000304236 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
RAB40A-201ENST00000304236 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
RAB40A-201ENST00000304236 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
RAB40A-201ENST00000304236 GRIN3BO60391 1043 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
RAB40A-201ENST00000304236 SMIM5Q71RC9 77 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 ZNF496Q96IT1 587 aaPredicted RBP17■□□□□ 0.31
RAB40A-201ENST00000304236 MYD88Q99836 296 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
RAB40A-201ENST00000304236 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 MYL6BP14649 208 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 COPRSQ9NQ92 184 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 CHD4Q14839 1912 aa17■□□□□ 0.31
RAB40A-201ENST00000304236 CASTP20810 708 aaKnown RBP16.99■□□□□ 0.31
RAB40A-201ENST00000304236 RUFY3Q7L099 469 aa16.99■□□□□ 0.31
RAB40A-201ENST00000304236 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
RAB40A-201ENST00000304236 ATP6V1DQ9Y5K8 247 aa16.99■□□□□ 0.31
RAB40A-201ENST00000304236 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
RAB40A-201ENST00000304236 PTH1RQ03431 593 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 NECTIN1Q15223 517 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 TMEM87AQ8NBN3 555 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 CCDC8Q9H0W5 538 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms