RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 C9orf78Q9NZ63 289 aaPredicted RBP36.23■■■■□ 3.39
COPS6-201ENST00000303904 LTBP3Q9NS15 1303 aa36.22■■■■□ 3.39
COPS6-201ENST00000303904 LMNB1P20700 586 aa36.22■■■■□ 3.39
COPS6-201ENST00000303904 JARID2Q92833 1246 aaPredicted RBP36.22■■■■□ 3.39
COPS6-201ENST00000303904 IPO8O15397 1037 aaKnown RBP36.21■■■■□ 3.39
COPS6-201ENST00000303904 NOB1Q9ULX3 412 aaKnown RBP36.21■■■■□ 3.39
COPS6-201ENST00000303904 NFKBIEO00221 500 aa36.19■■■■□ 3.38
COPS6-201ENST00000303904 CTSWP56202 376 aa36.19■■■■□ 3.38
COPS6-201ENST00000303904 RASSF7Q02833 373 aa36.19■■■■□ 3.38
COPS6-201ENST00000303904 C9orf131Q5VYM1 1079 aa36.19■■■■□ 3.38
COPS6-201ENST00000303904 RNF181Q9P0P0 153 aa36.19■■■■□ 3.38
COPS6-201ENST00000303904 GRM8O00222 908 aa36.18■■■■□ 3.38
COPS6-201ENST00000303904 ARHGAP45Q92619 1136 aa36.18■■■■□ 3.38
COPS6-201ENST00000303904 ATP6V0A2Q9Y487 856 aa36.18■■■■□ 3.38
COPS6-201ENST00000303904 PLA2G12BQ9BX93 195 aa36.17■■■■□ 3.38
COPS6-201ENST00000303904 FKBP4Q02790 459 aaKnown RBP eCLIP36.17■■■■□ 3.38
COPS6-201ENST00000303904 FER1L6Q2WGJ9 1857 aa36.15■■■■□ 3.38
COPS6-201ENST00000303904 CCT4P50991 539 aaKnown RBP36.15■■■■□ 3.38
COPS6-201ENST00000303904 SP8Q8IXZ3 490 aa36.15■■■■□ 3.38
COPS6-201ENST00000303904 ZC3H4Q9UPT8 1303 aaKnown RBP36.14■■■■□ 3.38
COPS6-201ENST00000303904 CDC5LQ99459 802 aaKnown RBP36.14■■■■□ 3.38
COPS6-201ENST00000303904 PSMD1Q99460 953 aa36.13■■■■□ 3.37
COPS6-201ENST00000303904 CASP7P55210 303 aa36.12■■■■□ 3.37
COPS6-201ENST00000303904 RPS8P62241 208 aaKnown RBP36.12■■■■□ 3.37
COPS6-201ENST00000303904 TTLL11Q8NHH1 800 aa36.12■■■■□ 3.37
COPS6-201ENST00000303904 OLFM4Q6UX06 510 aa36.1■■■■□ 3.37
COPS6-201ENST00000303904 FRAT1Q92837 279 aaPredicted RBP36.1■■■■□ 3.37
COPS6-201ENST00000303904 CELF1Q92879 486 aaKnown RBP36.1■■■■□ 3.37
COPS6-201ENST00000303904 CCDC85AQ96PX6 553 aaPredicted RBP36.1■■■■□ 3.37
COPS6-201ENST00000303904 RTL9Q8NET4 1388 aa36.1■■■■□ 3.37
COPS6-201ENST00000303904 MYH3P11055 1940 aa36.1■■■■□ 3.37
COPS6-201ENST00000303904 ANKRD18AQ8IVF6 992 aa36.09■■■■□ 3.37
COPS6-201ENST00000303904 SUPT20HQ8NEM7 779 aa36.09■■■■□ 3.37
COPS6-201ENST00000303904 BCAR3O75815 825 aa36.08■■■■□ 3.37
COPS6-201ENST00000303904 ZNF784Q8NCA9 323 aaPredicted RBP36.08■■■■□ 3.37
COPS6-201ENST00000303904 SBF1O95248 1867 aa36.08■■■■□ 3.37
COPS6-201ENST00000303904 SEC31BQ9NQW1 1179 aa36.08■■■■□ 3.37
COPS6-201ENST00000303904 DPP8Q6V1X1 898 aaPredicted RBP36.07■■■■□ 3.36
COPS6-201ENST00000303904 MPNDQ8N594 471 aa36.07■■■■□ 3.36
COPS6-201ENST00000303904 ATF7IPQ6VMQ6 1270 aa36.06■■■■□ 3.36
COPS6-201ENST00000303904 GREM2Q9H772 168 aa36.06■■■■□ 3.36
COPS6-201ENST00000303904 HDAC5Q9UQL6 1122 aa36.06■■■■□ 3.36
COPS6-201ENST00000303904 CSF1RP07333 972 aa36.05■■■■□ 3.36
COPS6-201ENST00000303904 UTYO14607 1347 aa36.05■■■■□ 3.36
COPS6-201ENST00000303904 ZKSCAN2Q63HK3 967 aa36.04■■■■□ 3.36
COPS6-201ENST00000303904 VPS33BQ9H267 617 aa36.04■■■■□ 3.36
COPS6-201ENST00000303904 ZNF277Q9NRM2 450 aaPredicted RBP36.04■■■■□ 3.36
COPS6-201ENST00000303904 IGHMBP2P38935 993 aaKnown RBP36.03■■■■□ 3.36
COPS6-201ENST00000303904 IARSP41252 1262 aaKnown RBP36.03■■■■□ 3.36
COPS6-201ENST00000303904 CHMP3Q9Y3E7 222 aa36.03■■■■□ 3.36
COPS6-201ENST00000303904 SNED1Q8TER0 1413 aa36.02■■■■□ 3.36
COPS6-201ENST00000303904 ANKRD18BA2A2Z9 1011 aa36.01■■■■□ 3.36
COPS6-201ENST00000303904 NBPF7P0C2Y1 421 aaPredicted RBP36.01■■■■□ 3.36
COPS6-201ENST00000303904 ITGA6P23229 1130 aa36.01■■■■□ 3.36
COPS6-201ENST00000303904 JDP2Q8WYK2 163 aa36.01■■■■□ 3.36
COPS6-201ENST00000303904 GPBP1L1Q9HC44 474 aaPredicted RBP36.01■■■■□ 3.36
COPS6-201ENST00000303904 KDM2BQ8NHM5 1336 aa36.01■■■■□ 3.35
COPS6-201ENST00000303904 PRELPP51888 382 aa36■■■■□ 3.35
COPS6-201ENST00000303904 FOXO4P98177 505 aa36■■■■□ 3.35
COPS6-201ENST00000303904 IFIT5Q13325 482 aaKnown RBP36■■■■□ 3.35
COPS6-201ENST00000303904 NSFL1CQ9UNZ2 370 aaKnown RBP36■■■■□ 3.35
COPS6-201ENST00000303904 TRIM27P14373 513 aa36■■■■□ 3.35
COPS6-201ENST00000303904 FAM161AQ3B820 660 aa36■■■■□ 3.35
COPS6-201ENST00000303904 DPY19L2Q6NUT2 758 aa36■■■■□ 3.35
COPS6-201ENST00000303904 RTFDC1Q9BY42 306 aaPredicted RBP36■■■■□ 3.35
COPS6-201ENST00000303904 TAF1P21675 1872 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 CCDC88AQ3V6T2 1871 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 CCDC57Q2TAC2 916 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 LMBR1LQ6UX01 489 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 MPHOSPH8Q99549 860 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 USP44Q9H0E7 712 aa35.99■■■■□ 3.35
COPS6-201ENST00000303904 BSDC1Q9NW68 430 aaPredicted RBP35.99■■■■□ 3.35
COPS6-201ENST00000303904 INTS3Q68E01 1043 aaKnown RBP35.98■■■■□ 3.35
COPS6-201ENST00000303904 LRRC37AA6NMS7 1700 aa35.97■■■■□ 3.35
COPS6-201ENST00000303904 LARGE2Q8N3Y3 721 aa35.97■■■■□ 3.35
COPS6-201ENST00000303904 ZNF526Q8TF50 670 aaPredicted RBP35.97■■■■□ 3.35
COPS6-201ENST00000303904 ANKIB1Q9P2G1 1089 aa35.97■■■■□ 3.35
COPS6-201ENST00000303904 DICER1Q9UPY3 1922 aaKnown RBP35.96■■■■□ 3.35
COPS6-201ENST00000303904 UBTFL1P0CB47 393 aaPredicted RBP35.96■■■■□ 3.35
COPS6-201ENST00000303904 TAF7LQ5H9L4 462 aa35.96■■■■□ 3.35
COPS6-201ENST00000303904 FTSJ3Q8IY81 847 aaKnown RBP35.96■■■■□ 3.35
COPS6-201ENST00000303904 SUCLG2Q96I99 432 aa35.96■■■■□ 3.35
COPS6-201ENST00000303904 YTHDC1Q96MU7 727 aaKnown RBP35.96■■■■□ 3.35
COPS6-201ENST00000303904 PPIP5K2O43314 1243 aa35.95■■■■□ 3.35
COPS6-201ENST00000303904 TIAM2Q8IVF5 1701 aa35.94■■■■□ 3.34
COPS6-201ENST00000303904 EYA3Q99504 573 aa35.94■■■■□ 3.34
COPS6-201ENST00000303904 C6orf229H3BNL8 230 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 EPHA10Q5JZY3 1008 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 CLUAP1Q96AJ1 413 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 PODXL2Q9NZ53 605 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 RCAN3Q9UKA8 241 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 XDHP47989 1333 aa35.92■■■■□ 3.34
COPS6-201ENST00000303904 MS4A1P11836 297 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 GPSM2P81274 684 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 NIM1KQ8IY84 436 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 BICC1Q9H694 974 aaKnown RBP35.91■■■■□ 3.34
COPS6-201ENST00000303904 GLTPD2A6NH11 291 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 GNAI3P08754 354 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 SLC51AQ86UW1 340 aa35.91■■■■□ 3.34
COPS6-201ENST00000303904 GGA1Q9UJY5 639 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms