RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 HCLS1P14317 486 aaPredicted RBP11.08□□□□□ -0.64
VPREB1-201ENST00000302273 FOXO4P98177 505 aa11.08□□□□□ -0.64
VPREB1-201ENST00000302273 CDC5LQ99459 802 aaKnown RBP11.08□□□□□ -0.64
VPREB1-201ENST00000302273 ABCC12Q96J65 1359 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 RLBP1P12271 317 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 DPEP1P16444 411 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 RPS8P62241 208 aaKnown RBP11.07□□□□□ -0.64
VPREB1-201ENST00000302273 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
VPREB1-201ENST00000302273 CCDC57Q2TAC2 916 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 DALRD3Q5D0E6 543 aaKnown RBP11.07□□□□□ -0.64
VPREB1-201ENST00000302273 RPAP2Q8IXW5 612 aaPredicted RBP11.07□□□□□ -0.64
VPREB1-201ENST00000302273 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
VPREB1-201ENST00000302273 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 PLIN1O60240 522 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 GRAPQ13588 217 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 GRAPLQ8TC17 118 aaPredicted RBP11.06□□□□□ -0.64
VPREB1-201ENST00000302273 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 KAZALD1Q96I82 304 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 MEIS3Q99687 375 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 VPS33BQ9H267 617 aa11.06□□□□□ -0.64
VPREB1-201ENST00000302273 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
VPREB1-201ENST00000302273 ANKRD36CQ5JPF3 1778 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 RTL5Q5HYW3 569 aaPredicted RBP11.05□□□□□ -0.64
VPREB1-201ENST00000302273 LMBR1LQ6UX01 489 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 SP8Q8IXZ3 490 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 ZNF622Q969S3 477 aaKnown RBP eCLIP11.05□□□□□ -0.64
VPREB1-201ENST00000302273 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 COG6Q9Y2V7 657 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
VPREB1-201ENST00000302273 ITGA6P23229 1130 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 CHRNA5P30532 468 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 IGHMBP2P38935 993 aaKnown RBP11.04□□□□□ -0.64
VPREB1-201ENST00000302273 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 C7orf43Q8WVR3 580 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 BICC1Q9H694 974 aaKnown RBP11.04□□□□□ -0.64
VPREB1-201ENST00000302273 KIF13BQ9NQT8 1826 aa11.04□□□□□ -0.64
VPREB1-201ENST00000302273 HMMRO75330 724 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 CIAO1O76071 339 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 PRPF40BQ6NWY9 871 aaKnown RBP11.03□□□□□ -0.64
VPREB1-201ENST00000302273 CCDC24Q8N4L8 307 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 NLGN2Q8NFZ4 835 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 GREM2Q9H772 168 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 COPRSQ9NQ92 184 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
VPREB1-201ENST00000302273 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
VPREB1-201ENST00000302273 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
VPREB1-201ENST00000302273 YY1P25490 414 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 C20orf194Q5TEA3 1177 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 SUPT20HQ8NEM7 779 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 SSH3Q8TE77 659 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 JARID2Q92833 1246 aaPredicted RBP11.02□□□□□ -0.65
VPREB1-201ENST00000302273 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 LTBP3Q9NS15 1303 aa11.02□□□□□ -0.65
VPREB1-201ENST00000302273 SRGAP3O43295 1099 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 POLA2Q14181 598 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 CCDC93Q567U6 631 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 TAF7LQ5H9L4 462 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 LDHAL6AQ6ZMR3 332 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 PSMD1Q99460 953 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 RTFDC1Q9BY42 306 aaPredicted RBP11.01□□□□□ -0.65
VPREB1-201ENST00000302273 BCS1LQ9Y276 419 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
VPREB1-201ENST00000302273 AFDNP55196 1824 aaKnown RBP11□□□□□ -0.65
VPREB1-201ENST00000302273 NEFLP07196 543 aa11□□□□□ -0.65
VPREB1-201ENST00000302273 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
VPREB1-201ENST00000302273 GPR162Q16538 588 aa11□□□□□ -0.65
VPREB1-201ENST00000302273 CEP85Q6P2H3 762 aa11□□□□□ -0.65
VPREB1-201ENST00000302273 CELF1Q92879 486 aaKnown RBP11□□□□□ -0.65
VPREB1-201ENST00000302273 LEMD3Q9Y2U8 911 aa11□□□□□ -0.65
VPREB1-201ENST00000302273 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
VPREB1-201ENST00000302273 CHMP3Q9Y3E7 222 aa11□□□□□ -0.65
VPREB1-201ENST00000302273 N4BP2Q86UW6 1770 aaPredicted RBP11□□□□□ -0.65
VPREB1-201ENST00000302273 EYA2O00167 538 aa10.99□□□□□ -0.65
VPREB1-201ENST00000302273 ZBTB22O15209 634 aa10.99□□□□□ -0.65
VPREB1-201ENST00000302273 IL15P40933 162 aaPredicted RBP10.99□□□□□ -0.65
VPREB1-201ENST00000302273 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
VPREB1-201ENST00000302273 SEC31BQ9NQW1 1179 aa10.99□□□□□ -0.65
VPREB1-201ENST00000302273 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
VPREB1-201ENST00000302273 RIPOR2Q9Y4F9 1068 aa10.99□□□□□ -0.65
VPREB1-201ENST00000302273 C21orf2O43822 256 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 ATP2B4P23634 1241 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 FKBP4Q02790 459 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPREB1-201ENST00000302273 ERC1Q8IUD2 1116 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 MPNDQ8N594 471 aa10.98□□□□□ -0.65
VPREB1-201ENST00000302273 EYA3Q99504 573 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms