RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 CASP7P55210 303 aa23.16■■□□□ 1.3
SPSB3-201ENST00000301717 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
SPSB3-201ENST00000301717 SOGA3Q5TF21 947 aa23.16■■□□□ 1.3
SPSB3-201ENST00000301717 SBF1O95248 1867 aa23.16■■□□□ 1.3
SPSB3-201ENST00000301717 CDHR2Q9BYE9 1310 aa23.16■■□□□ 1.3
SPSB3-201ENST00000301717 RARSP54136 660 aaKnown RBP23.16■■□□□ 1.3
SPSB3-201ENST00000301717 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.3
SPSB3-201ENST00000301717 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
SPSB3-201ENST00000301717 CTSWP56202 376 aa23.14■■□□□ 1.29
SPSB3-201ENST00000301717 ATP6V0A2Q9Y487 856 aa23.14■■□□□ 1.29
SPSB3-201ENST00000301717 CT47B1P0C2W7 299 aaPredicted RBP23.13■■□□□ 1.29
SPSB3-201ENST00000301717 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
SPSB3-201ENST00000301717 NOB1Q9ULX3 412 aaKnown RBP23.13■■□□□ 1.29
SPSB3-201ENST00000301717 PTPRCP08575 1304 aa23.13■■□□□ 1.29
SPSB3-201ENST00000301717 CCDC152Q4G0S7 254 aa23.12■■□□□ 1.29
SPSB3-201ENST00000301717 SRCIN1Q9C0H9 1055 aa23.12■■□□□ 1.29
SPSB3-201ENST00000301717 BCAR3O75815 825 aa23.11■■□□□ 1.29
SPSB3-201ENST00000301717 BBOX1O75936 387 aa23.11■■□□□ 1.29
SPSB3-201ENST00000301717 TTLL11Q8NHH1 800 aa23.11■■□□□ 1.29
SPSB3-201ENST00000301717 GREM2Q9H772 168 aa23.11■■□□□ 1.29
SPSB3-201ENST00000301717 GPBP1L1Q9HC44 474 aaPredicted RBP23.11■■□□□ 1.29
SPSB3-201ENST00000301717 CCDC88AQ3V6T2 1871 aa23.1■■□□□ 1.29
SPSB3-201ENST00000301717 GRM8O00222 908 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 EPHA10Q5JZY3 1008 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 CC2D2BQ6DHV5 1058 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 SP8Q8IXZ3 490 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 TNNQ9UQP3 1299 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 COL4A5P29400 1685 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 TIAM2Q8IVF5 1701 aa23.09■■□□□ 1.29
SPSB3-201ENST00000301717 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
SPSB3-201ENST00000301717 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
SPSB3-201ENST00000301717 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.29
SPSB3-201ENST00000301717 PSMD1Q99460 953 aa23.08■■□□□ 1.29
SPSB3-201ENST00000301717 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.29
SPSB3-201ENST00000301717 ALDH1L1O75891 902 aa23.08■■□□□ 1.28
SPSB3-201ENST00000301717 FAM161AQ3B820 660 aa23.08■■□□□ 1.28
SPSB3-201ENST00000301717 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.28
SPSB3-201ENST00000301717 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
SPSB3-201ENST00000301717 FOXO4P98177 505 aa23.07■■□□□ 1.28
SPSB3-201ENST00000301717 DPP8Q6V1X1 898 aaPredicted RBP23.07■■□□□ 1.28
SPSB3-201ENST00000301717 MPNDQ8N594 471 aa23.07■■□□□ 1.28
SPSB3-201ENST00000301717 PLA2G12BQ9BX93 195 aa23.07■■□□□ 1.28
SPSB3-201ENST00000301717 GPSM2P81274 684 aa23.06■■□□□ 1.28
SPSB3-201ENST00000301717 GPR101Q96P66 508 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-201ENST00000301717 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-201ENST00000301717 BRPF1P55201 1214 aaPredicted RBP23.05■■□□□ 1.28
SPSB3-201ENST00000301717 AOC3Q16853 763 aa23.05■■□□□ 1.28
SPSB3-201ENST00000301717 SUCLG2Q96I99 432 aa23.05■■□□□ 1.28
SPSB3-201ENST00000301717 DUOX1Q9NRD9 1551 aa23.05■■□□□ 1.28
SPSB3-201ENST00000301717 ZNF541Q9H0D2 1346 aa23.04■■□□□ 1.28
SPSB3-201ENST00000301717 CSF1RP07333 972 aa23.04■■□□□ 1.28
SPSB3-201ENST00000301717 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
SPSB3-201ENST00000301717 KAZALD1Q96I82 304 aa23.04■■□□□ 1.28
SPSB3-201ENST00000301717 NSFL1CQ9UNZ2 370 aaKnown RBP23.04■■□□□ 1.28
SPSB3-201ENST00000301717 LRRC37AA6NMS7 1700 aa23.03■■□□□ 1.28
SPSB3-201ENST00000301717 ITGA6P23229 1130 aa23.03■■□□□ 1.28
SPSB3-201ENST00000301717 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
SPSB3-201ENST00000301717 LARGE2Q8N3Y3 721 aa23.03■■□□□ 1.28
SPSB3-201ENST00000301717 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
SPSB3-201ENST00000301717 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
SPSB3-201ENST00000301717 LMBR1LQ6UX01 489 aa23.02■■□□□ 1.28
SPSB3-201ENST00000301717 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
SPSB3-201ENST00000301717 RTFDC1Q9BY42 306 aaPredicted RBP23.02■■□□□ 1.28
SPSB3-201ENST00000301717 RRAGCQ9HB90 399 aa23.02■■□□□ 1.28
SPSB3-201ENST00000301717 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 ZC3H4Q9UPT8 1303 aaKnown RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 GLTPD2A6NH11 291 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 WTIPA6NIX2 430 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 KIF3CO14782 793 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 DDNO94850 711 aaPredicted RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 CDC5LQ99459 802 aaKnown RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 POLLQ9UGP5 575 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 MYH3P11055 1940 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 DICER1Q9UPY3 1922 aaKnown RBP23.01■■□□□ 1.27
SPSB3-201ENST00000301717 KIF16BQ96L93 1317 aa23.01■■□□□ 1.27
SPSB3-201ENST00000301717 GRIPAP1Q4V328 841 aa23■■□□□ 1.27
SPSB3-201ENST00000301717 USP44Q9H0E7 712 aa23■■□□□ 1.27
SPSB3-201ENST00000301717 UTYO14607 1347 aa23■■□□□ 1.27
SPSB3-201ENST00000301717 KDM2BQ8NHM5 1336 aa23■■□□□ 1.27
SPSB3-201ENST00000301717 CLUAP1Q96AJ1 413 aa22.99■■□□□ 1.27
SPSB3-201ENST00000301717 C6orf229H3BNL8 230 aa22.99■■□□□ 1.27
SPSB3-201ENST00000301717 RIMBP2O15034 1052 aa22.99■■□□□ 1.27
SPSB3-201ENST00000301717 TRIM27P14373 513 aa22.99■■□□□ 1.27
SPSB3-201ENST00000301717 ZNF594Q96JF6 807 aaPredicted RBP22.99■■□□□ 1.27
SPSB3-201ENST00000301717 BICC1Q9H694 974 aaKnown RBP22.99■■□□□ 1.27
SPSB3-201ENST00000301717 TBC1D16Q8TBP0 767 aa22.98■■□□□ 1.27
SPSB3-201ENST00000301717 JDP2Q8WYK2 163 aa22.98■■□□□ 1.27
SPSB3-201ENST00000301717 YTHDC1Q96MU7 727 aaKnown RBP22.98■■□□□ 1.27
SPSB3-201ENST00000301717 ANKIB1Q9P2G1 1089 aa22.98■■□□□ 1.27
SPSB3-201ENST00000301717 SPEF2Q9C093 1822 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 FZD9O00144 591 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 CCT4P50991 539 aaKnown RBP22.97■■□□□ 1.27
SPSB3-201ENST00000301717 KIAA2012Q0VF49 1180 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 LTBP1Q14766 1721 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 SUPT20HQ8NEM7 779 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 MINPP1Q9UNW1 487 aa22.97■■□□□ 1.27
SPSB3-201ENST00000301717 ANKRD18BA2A2Z9 1011 aa22.96■■□□□ 1.27
SPSB3-201ENST00000301717 POTECB2RU33 542 aa22.96■■□□□ 1.27
SPSB3-201ENST00000301717 UFL1O94874 794 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms