RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
RPUSD4-201ENST00000298317 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
RPUSD4-201ENST00000298317 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
RPUSD4-201ENST00000298317 NPHP4O75161 1426 aaPredicted RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 PNMA6AP0CW24 399 aaPredicted RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 RPS6KB1P23443 525 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 HNRNPH2P55795 449 aaKnown RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 SNW1Q13573 536 aaKnown RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 BLOC1S2Q6QNY1 142 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 EVI5LQ96CN4 794 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 NBPF7P0C2Y1 421 aaPredicted RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 E4F1Q66K89 784 aaPredicted RBP15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 GTF3C6Q969F1 213 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
RPUSD4-201ENST00000298317 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 BECN2A8MW95 431 aa15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 ZRANB2O95218 330 aaKnown RBP eCLIP15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 LRRN4CLQ8ND94 238 aa15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 RICTORQ6R327 1708 aa15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 PPP1R13BQ96KQ4 1090 aa15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 IMPACTQ9P2X3 320 aa15.83■□□□□ 0.12
RPUSD4-201ENST00000298317 TECPR2O15040 1411 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 METP08581 1390 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 PSDA5PKW4 1024 aaPredicted RBP15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 NPHP1O15259 732 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 KCNJ6P48051 423 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 NBPF11Q86T75 865 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 CLASRPQ8N2M8 674 aaKnown RBP15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 TCEANC2Q96MN5 208 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 PHAXQ9H814 394 aaKnown RBP15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 CFAP45Q9UL16 551 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 IGSF1Q8N6C5 1336 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 MMP14P50281 582 aa15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.82■□□□□ 0.12
RPUSD4-201ENST00000298317 HIP1O00291 1037 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 TUBB4AP04350 444 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 GPATCH3Q96I76 525 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 ANO10Q9NW15 660 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 BABAM1Q9NWV8 329 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 TOPAZ1Q8N9V7 1692 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 JCADQ9P266 1359 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 MTX1Q13505 466 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 BRF1Q92994 677 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 TRIM34Q9BYJ4 488 aa15.81■□□□□ 0.12
RPUSD4-201ENST00000298317 MYH15Q9Y2K3 1946 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 JAK2O60674 1132 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 RAD51AP2Q09MP3 1159 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 SYT10Q6XYQ8 523 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 GOLPH3LQ9H4A5 285 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 FEZ2Q9UHY8 353 aaPredicted RBP15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 MED23Q9ULK4 1368 aa15.8■□□□□ 0.12
RPUSD4-201ENST00000298317 USP6P35125 1406 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 ADD1P35611 737 aaKnown RBP15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 TSGA10IPQ3SY00 556 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 CEP57L1Q8IYX8 460 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 CCDC150Q8NCX0 1101 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 TAF6LQ9Y6J9 622 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 FLT4P35916 1363 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 STK3Q13188 491 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 MUM1L1Q5H9M0 696 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 UBXN6Q9BZV1 441 aa15.79■□□□□ 0.12
RPUSD4-201ENST00000298317 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 AOPEPQ8N6M6 819 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 ENGASEQ8NFI3 743 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 RCOR1Q9UKL0 485 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 SBNO1A3KN83 1393 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 ARMCX5Q6P1M9 558 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 EYA1Q99502 592 aa15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 ARGLU1Q9NWB6 273 aaPredicted RBP15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 ORC3Q9UBD5 711 aaPredicted RBP15.78■□□□□ 0.12
RPUSD4-201ENST00000298317 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 TPM4P67936 248 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 TEX35Q5T0J7 233 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 TMCO3Q6UWJ1 677 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 DDX11Q96FC9 970 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 YY1AP1Q9H869 796 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 A0A087WWV3 80 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 A0A0D9SFI3 127 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
RPUSD4-201ENST00000298317 ACEP12821 1306 aa15.77■□□□□ 0.11
RPUSD4-201ENST00000298317 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.11
RPUSD4-201ENST00000298317 H3BQV1 296 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 ATP8B1O43520 1251 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 KINO60870 393 aaKnown RBP15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 FAM160A1Q05DH4 1040 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 IFFO2Q5TF58 517 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 CCDC73Q6ZRK6 1079 aa15.76■□□□□ 0.11
RPUSD4-201ENST00000298317 ERC1Q8IUD2 1116 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms