RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 PPEF1O14829 653 aaPredicted RBP29.73■■■□□ 2.35
GBX1-201ENST00000297537 RTKN2Q8IZC4 609 aa29.73■■■□□ 2.35
GBX1-201ENST00000297537 ALDH1L1O75891 902 aa29.72■■■□□ 2.35
GBX1-201ENST00000297537 UBE3BQ7Z3V4 1068 aa29.72■■■□□ 2.35
GBX1-201ENST00000297537 PLA2G12BQ9BX93 195 aa29.72■■■□□ 2.35
GBX1-201ENST00000297537 TAOK3Q9H2K8 898 aa29.72■■■□□ 2.35
GBX1-201ENST00000297537 ATP6V0A2Q9Y487 856 aa29.72■■■□□ 2.35
GBX1-201ENST00000297537 SLC4A10Q6U841 1118 aa29.71■■■□□ 2.35
GBX1-201ENST00000297537 SLC51AQ86UW1 340 aa29.71■■■□□ 2.35
GBX1-201ENST00000297537 RNF181Q9P0P0 153 aa29.71■■■□□ 2.35
GBX1-201ENST00000297537 GRIPAP1Q4V328 841 aa29.7■■■□□ 2.35
GBX1-201ENST00000297537 SRCIN1Q9C0H9 1055 aa29.7■■■□□ 2.35
GBX1-201ENST00000297537 FKBP4Q02790 459 aaKnown RBP eCLIP29.69■■■□□ 2.34
GBX1-201ENST00000297537 CCDC152Q4G0S7 254 aa29.69■■■□□ 2.34
GBX1-201ENST00000297537 SP8Q8IXZ3 490 aa29.69■■■□□ 2.34
GBX1-201ENST00000297537 TTLL11Q8NHH1 800 aa29.69■■■□□ 2.34
GBX1-201ENST00000297537 CELF1Q92879 486 aaKnown RBP29.69■■■□□ 2.34
GBX1-201ENST00000297537 NOB1Q9ULX3 412 aaKnown RBP29.69■■■□□ 2.34
GBX1-201ENST00000297537 CTSWP56202 376 aa29.68■■■□□ 2.34
GBX1-201ENST00000297537 PSMD1Q99460 953 aa29.68■■■□□ 2.34
GBX1-201ENST00000297537 TMC4Q7Z404 712 aa29.67■■■□□ 2.34
GBX1-201ENST00000297537 SEC31BQ9NQW1 1179 aa29.67■■■□□ 2.34
GBX1-201ENST00000297537 TAF1P21675 1872 aa29.67■■■□□ 2.34
GBX1-201ENST00000297537 COL4A1P02462 1669 aa29.66■■■□□ 2.34
GBX1-201ENST00000297537 GRM8O00222 908 aa29.65■■■□□ 2.34
GBX1-201ENST00000297537 RPS8P62241 208 aaKnown RBP29.65■■■□□ 2.34
GBX1-201ENST00000297537 ZC3H4Q9UPT8 1303 aaKnown RBP29.65■■■□□ 2.34
GBX1-201ENST00000297537 CSF1RP07333 972 aa29.64■■■□□ 2.34
GBX1-201ENST00000297537 ARHGAP45Q92619 1136 aa29.64■■■□□ 2.34
GBX1-201ENST00000297537 RTL9Q8NET4 1388 aa29.64■■■□□ 2.33
GBX1-201ENST00000297537 CCDC85AQ96PX6 553 aaPredicted RBP29.63■■■□□ 2.33
GBX1-201ENST00000297537 UTYO14607 1347 aa29.63■■■□□ 2.33
GBX1-201ENST00000297537 CCDC88AQ3V6T2 1871 aa29.63■■■□□ 2.33
GBX1-201ENST00000297537 BCAR3O75815 825 aa29.62■■■□□ 2.33
GBX1-201ENST00000297537 FOXO4P98177 505 aa29.62■■■□□ 2.33
GBX1-201ENST00000297537 GREM2Q9H772 168 aa29.62■■■□□ 2.33
GBX1-201ENST00000297537 ZNF277Q9NRM2 450 aaPredicted RBP29.62■■■□□ 2.33
GBX1-201ENST00000297537 C9orf78Q9NZ63 289 aaPredicted RBP29.62■■■□□ 2.33
GBX1-201ENST00000297537 RTFDC1Q9BY42 306 aaPredicted RBP29.61■■■□□ 2.33
GBX1-201ENST00000297537 API5Q9BZZ5 524 aaKnown RBP29.61■■■□□ 2.33
GBX1-201ENST00000297537 TMX4Q9H1E5 349 aaPredicted RBP29.61■■■□□ 2.33
GBX1-201ENST00000297537 KIF16BQ96L93 1317 aa29.61■■■□□ 2.33
GBX1-201ENST00000297537 MYH3P11055 1940 aa29.59■■■□□ 2.33
GBX1-201ENST00000297537 DICER1Q9UPY3 1922 aaKnown RBP29.59■■■□□ 2.33
GBX1-201ENST00000297537 NBPF7P0C2Y1 421 aaPredicted RBP29.59■■■□□ 2.33
GBX1-201ENST00000297537 LRRC37AA6NMS7 1700 aa29.58■■■□□ 2.33
GBX1-201ENST00000297537 IARSP41252 1262 aaKnown RBP29.58■■■□□ 2.33
GBX1-201ENST00000297537 EPHA10Q5JZY3 1008 aa29.58■■■□□ 2.33
GBX1-201ENST00000297537 USP44Q9H0E7 712 aa29.58■■■□□ 2.33
GBX1-201ENST00000297537 MPNDQ8N594 471 aa29.57■■■□□ 2.32
GBX1-201ENST00000297537 KAZALD1Q96I82 304 aa29.57■■■□□ 2.32
GBX1-201ENST00000297537 CCT4P50991 539 aaKnown RBP29.56■■■□□ 2.32
GBX1-201ENST00000297537 DPP8Q6V1X1 898 aaPredicted RBP29.56■■■□□ 2.32
GBX1-201ENST00000297537 ANKRD18AQ8IVF6 992 aa29.56■■■□□ 2.32
GBX1-201ENST00000297537 CDC5LQ99459 802 aaKnown RBP29.56■■■□□ 2.32
GBX1-201ENST00000297537 VPS33BQ9H267 617 aa29.56■■■□□ 2.32
GBX1-201ENST00000297537 ZNF526Q8TF50 670 aaPredicted RBP29.55■■■□□ 2.32
GBX1-201ENST00000297537 SUCLG2Q96I99 432 aa29.55■■■□□ 2.32
GBX1-201ENST00000297537 GPBP1L1Q9HC44 474 aaPredicted RBP29.55■■■□□ 2.32
GBX1-201ENST00000297537 IPO8O15397 1037 aaKnown RBP29.54■■■□□ 2.32
GBX1-201ENST00000297537 ITGA6P23229 1130 aa29.54■■■□□ 2.32
GBX1-201ENST00000297537 FAM161AQ3B820 660 aa29.54■■■□□ 2.32
GBX1-201ENST00000297537 SUPT20HQ8NEM7 779 aa29.54■■■□□ 2.32
GBX1-201ENST00000297537 GLTPD2A6NH11 291 aa29.53■■■□□ 2.32
GBX1-201ENST00000297537 LMBR1LQ6UX01 489 aa29.53■■■□□ 2.32
GBX1-201ENST00000297537 ATF7IPQ6VMQ6 1270 aa29.53■■■□□ 2.32
GBX1-201ENST00000297537 BSDC1Q9NW68 430 aaPredicted RBP29.53■■■□□ 2.32
GBX1-201ENST00000297537 PODXL2Q9NZ53 605 aa29.53■■■□□ 2.32
GBX1-201ENST00000297537 TIAM2Q8IVF5 1701 aa29.52■■■□□ 2.32
GBX1-201ENST00000297537 TRIM27P14373 513 aa29.52■■■□□ 2.32
GBX1-201ENST00000297537 GPSM2P81274 684 aa29.52■■■□□ 2.32
GBX1-201ENST00000297537 INTS3Q68E01 1043 aaKnown RBP29.52■■■□□ 2.32
GBX1-201ENST00000297537 NSFL1CQ9UNZ2 370 aaKnown RBP29.52■■■□□ 2.32
GBX1-201ENST00000297537 FZD9O00144 591 aa29.51■■■□□ 2.31
GBX1-201ENST00000297537 FRAT1Q92837 279 aaPredicted RBP29.51■■■□□ 2.31
GBX1-201ENST00000297537 DUOX1Q9NRD9 1551 aa29.51■■■□□ 2.31
GBX1-201ENST00000297537 COL4A5P29400 1685 aa29.5■■■□□ 2.31
GBX1-201ENST00000297537 POLLQ9UGP5 575 aa29.5■■■□□ 2.31
GBX1-201ENST00000297537 KDM2BQ8NHM5 1336 aa29.49■■■□□ 2.31
GBX1-201ENST00000297537 LTBP1Q14766 1721 aa29.49■■■□□ 2.31
GBX1-201ENST00000297537 RABL6Q3YEC7 729 aaPredicted RBP29.49■■■□□ 2.31
GBX1-201ENST00000297537 TNNQ9UQP3 1299 aa29.49■■■□□ 2.31
GBX1-201ENST00000297537 ANKRD18BA2A2Z9 1011 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 PPIP5K2O43314 1243 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 KIAA2012Q0VF49 1180 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 IFIT5Q13325 482 aaKnown RBP29.48■■■□□ 2.31
GBX1-201ENST00000297537 AOC3Q16853 763 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 DPY19L2Q6NUT2 758 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 LARGE2Q8N3Y3 721 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 MINPP1Q9UNW1 487 aa29.48■■■□□ 2.31
GBX1-201ENST00000297537 IGHMBP2P38935 993 aaKnown RBP29.47■■■□□ 2.31
GBX1-201ENST00000297537 ZKSCAN2Q63HK3 967 aa29.47■■■□□ 2.31
GBX1-201ENST00000297537 TBC1D16Q8TBP0 767 aa29.47■■■□□ 2.31
GBX1-201ENST00000297537 JDP2Q8WYK2 163 aa29.47■■■□□ 2.31
GBX1-201ENST00000297537 BICC1Q9H694 974 aaKnown RBP29.47■■■□□ 2.31
GBX1-201ENST00000297537 ANKRD44Q8N8A2 993 aa29.46■■■□□ 2.31
GBX1-201ENST00000297537 NMRK2Q9NPI5 230 aa29.46■■■□□ 2.31
GBX1-201ENST00000297537 KIF3CO14782 793 aa29.45■■■□□ 2.31
GBX1-201ENST00000297537 CCDC57Q2TAC2 916 aa29.44■■■□□ 2.3
GBX1-201ENST00000297537 MPHOSPH8Q99549 860 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms