RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SF3B3Q15393 1217 aaKnown RBP32.66■■■□□ 2.82
U2AF1-201ENST00000291552 RTL5Q5HYW3 569 aaPredicted RBP32.66■■■□□ 2.82
U2AF1-201ENST00000291552 DPP8Q6V1X1 898 aaPredicted RBP32.66■■■□□ 2.82
U2AF1-201ENST00000291552 ZEB1P37275 1124 aaPredicted RBP32.65■■■□□ 2.82
U2AF1-201ENST00000291552 GOLGA2Q08379 1002 aa32.65■■■□□ 2.82
U2AF1-201ENST00000291552 RIC3Q7Z5B4 369 aa32.65■■■□□ 2.82
U2AF1-201ENST00000291552 MPNDQ8N594 471 aa32.65■■■□□ 2.82
U2AF1-201ENST00000291552 TSR2Q969E8 191 aaKnown RBP32.65■■■□□ 2.82
U2AF1-201ENST00000291552 TMX4Q9H1E5 349 aaPredicted RBP32.65■■■□□ 2.82
U2AF1-201ENST00000291552 VPS33BQ9H267 617 aa32.65■■■□□ 2.82
U2AF1-201ENST00000291552 PNMA8AQ86V59 439 aaPredicted RBP32.64■■■□□ 2.82
U2AF1-201ENST00000291552 SUPT20HQ8NEM7 779 aa32.64■■■□□ 2.82
U2AF1-201ENST00000291552 CELF1Q92879 486 aaKnown RBP32.64■■■□□ 2.82
U2AF1-201ENST00000291552 EPS15P42566 896 aa32.63■■■□□ 2.81
U2AF1-201ENST00000291552 CLEC11AQ9Y240 323 aa32.63■■■□□ 2.81
U2AF1-201ENST00000291552 IRS4O14654 1257 aaPredicted RBP32.62■■■□□ 2.81
U2AF1-201ENST00000291552 KIAA2012Q0VF49 1180 aa32.62■■■□□ 2.81
U2AF1-201ENST00000291552 CCDC27Q2M243 656 aa32.62■■■□□ 2.81
U2AF1-201ENST00000291552 MAP1SQ66K74 1059 aaPredicted RBP32.62■■■□□ 2.81
U2AF1-201ENST00000291552 WWC1Q8IX03 1113 aa32.61■■■□□ 2.81
U2AF1-201ENST00000291552 MYD88Q99836 296 aa32.61■■■□□ 2.81
U2AF1-201ENST00000291552 ZNRF3Q9ULT6 936 aa32.61■■■□□ 2.81
U2AF1-201ENST00000291552 CXCL9Q07325 125 aa32.6■■■□□ 2.81
U2AF1-201ENST00000291552 TMC4Q7Z404 712 aa32.6■■■□□ 2.81
U2AF1-201ENST00000291552 MKRN1Q9UHC7 482 aaKnown RBP32.6■■■□□ 2.81
U2AF1-201ENST00000291552 LMOD1P29536 600 aaPredicted RBP32.59■■■□□ 2.81
U2AF1-201ENST00000291552 CCDC30Q5VVM6 783 aa32.59■■■□□ 2.81
U2AF1-201ENST00000291552 ZNF316A6NFI3 1004 aaPredicted RBP32.58■■■□□ 2.81
U2AF1-201ENST00000291552 ZBTB38Q8NAP3 1195 aaPredicted RBP32.58■■■□□ 2.81
U2AF1-201ENST00000291552 TRPM7Q96QT4 1865 aa32.58■■■□□ 2.81
U2AF1-201ENST00000291552 CNTNAP1P78357 1384 aa32.58■■■□□ 2.81
U2AF1-201ENST00000291552 CNTROBQ8N137 903 aa32.57■■■□□ 2.8
U2AF1-201ENST00000291552 MRS2Q9HD23 443 aa32.57■■■□□ 2.8
U2AF1-201ENST00000291552 MYH3P11055 1940 aa32.57■■■□□ 2.8
U2AF1-201ENST00000291552 METTL22Q9BUU2 404 aaPredicted RBP32.56■■■□□ 2.8
U2AF1-201ENST00000291552 YDJCA8MPS7 323 aa32.55■■■□□ 2.8
U2AF1-201ENST00000291552 CCDC191Q8NCU4 936 aa32.55■■■□□ 2.8
U2AF1-201ENST00000291552 GPRC5DQ9NZD1 345 aa32.55■■■□□ 2.8
U2AF1-201ENST00000291552 TMEM88BA6NKF7 163 aa32.54■■■□□ 2.8
U2AF1-201ENST00000291552 PCCAP05165 728 aaPredicted RBP32.54■■■□□ 2.8
U2AF1-201ENST00000291552 HSPA1AP0DMV8 641 aaKnown RBP32.54■■■□□ 2.8
U2AF1-201ENST00000291552 HSPA1BP0DMV9 641 aaKnown RBP32.54■■■□□ 2.8
U2AF1-201ENST00000291552 JARID2Q92833 1246 aaPredicted RBP32.54■■■□□ 2.8
U2AF1-201ENST00000291552 CACNA1FO60840 1977 aa32.54■■■□□ 2.8
U2AF1-201ENST00000291552 GMPSP49915 693 aaPredicted RBP32.53■■■□□ 2.8
U2AF1-201ENST00000291552 GPSM2P81274 684 aa32.53■■■□□ 2.8
U2AF1-201ENST00000291552 SEC31BQ9NQW1 1179 aa32.53■■■□□ 2.8
U2AF1-201ENST00000291552 IL16Q14005 1332 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 SCN9AQ15858 1988 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 SPEF2Q9C093 1822 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 RAD17O75943 681 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 CIAPIN1Q6FI81 312 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 USP50Q70EL3 339 aaPredicted RBP32.52■■■□□ 2.8
U2AF1-201ENST00000291552 CWC25Q9NXE8 425 aaPredicted RBP32.52■■■□□ 2.8
U2AF1-201ENST00000291552 MAP3K2Q9Y2U5 619 aa32.52■■■□□ 2.8
U2AF1-201ENST00000291552 DDX58O95786 925 aaKnown RBP32.51■■■□□ 2.79
U2AF1-201ENST00000291552 FMR1Q06787 632 aaKnown RBP eCLIP32.51■■■□□ 2.79
U2AF1-201ENST00000291552 NCBP3Q53F19 620 aaKnown RBP32.51■■■□□ 2.79
U2AF1-201ENST00000291552 COL13A1Q5TAT6 717 aaPredicted RBP32.51■■■□□ 2.79
U2AF1-201ENST00000291552 POLLQ9UGP5 575 aa32.51■■■□□ 2.79
U2AF1-201ENST00000291552 ANP32CO43423 234 aa32.5■■■□□ 2.79
U2AF1-201ENST00000291552 IGKV5-2P06315 115 aa32.5■■■□□ 2.79
U2AF1-201ENST00000291552 RPS8P62241 208 aaKnown RBP32.5■■■□□ 2.79
U2AF1-201ENST00000291552 TWISTNBQ3B726 338 aaPredicted RBP32.5■■■□□ 2.79
U2AF1-201ENST00000291552 G2E3Q7L622 706 aa32.5■■■□□ 2.79
U2AF1-201ENST00000291552 NSFL1CQ9UNZ2 370 aaKnown RBP32.5■■■□□ 2.79
U2AF1-201ENST00000291552 PI4KAP2A4QPH2 592 aa32.49■■■□□ 2.79
U2AF1-201ENST00000291552 KSR2Q6VAB6 950 aa32.49■■■□□ 2.79
U2AF1-201ENST00000291552 PI4KAP1Q8N8J0 262 aa32.49■■■□□ 2.79
U2AF1-201ENST00000291552 CHMP4AQ9BY43 222 aa32.49■■■□□ 2.79
U2AF1-201ENST00000291552 ADARB2Q9NS39 739 aaKnown RBP32.49■■■□□ 2.79
U2AF1-201ENST00000291552 GPR101Q96P66 508 aaPredicted RBP32.48■■■□□ 2.79
U2AF1-201ENST00000291552 FANCIQ9NVI1 1328 aa32.48■■■□□ 2.79
U2AF1-201ENST00000291552 PDE8AO60658 829 aa32.47■■■□□ 2.79
U2AF1-201ENST00000291552 CDHR2Q9BYE9 1310 aa32.47■■■□□ 2.79
U2AF1-201ENST00000291552 SHTN1A0MZ66 631 aa32.46■■■□□ 2.79
U2AF1-201ENST00000291552 WASHC4Q2M389 1173 aa32.46■■■□□ 2.79
U2AF1-201ENST00000291552 STK31Q9BXU1 1019 aa32.46■■■□□ 2.79
U2AF1-201ENST00000291552 PSME4Q14997 1843 aa32.45■■■□□ 2.79
U2AF1-201ENST00000291552 VEGFBP49765 207 aa32.45■■■□□ 2.79
U2AF1-201ENST00000291552 TNIP1Q15025 636 aa32.45■■■□□ 2.79
U2AF1-201ENST00000291552 TBC1D16Q8TBP0 767 aa32.45■■■□□ 2.79
U2AF1-201ENST00000291552 CCDC85AQ96PX6 553 aaPredicted RBP32.45■■■□□ 2.79
U2AF1-201ENST00000291552 DBNDD1Q9H9R9 158 aa32.45■■■□□ 2.79
U2AF1-201ENST00000291552 C6orf229H3BNL8 230 aa32.44■■■□□ 2.78
U2AF1-201ENST00000291552 TRAF5O00463 557 aa32.44■■■□□ 2.78
U2AF1-201ENST00000291552 RIMBP2O15034 1052 aa32.44■■■□□ 2.78
U2AF1-201ENST00000291552 HSP90B1P14625 803 aaKnown RBP32.44■■■□□ 2.78
U2AF1-201ENST00000291552 CCDC152Q4G0S7 254 aa32.44■■■□□ 2.78
U2AF1-201ENST00000291552 TRPM4Q8TD43 1214 aa32.43■■■□□ 2.78
U2AF1-201ENST00000291552 RASSF10A6NK89 507 aa32.42■■■□□ 2.78
U2AF1-201ENST00000291552 HIRAP54198 1017 aaPredicted RBP32.42■■■□□ 2.78
U2AF1-201ENST00000291552 CWF19L2Q2TBE0 894 aaKnown RBP32.42■■■□□ 2.78
U2AF1-201ENST00000291552 BCL2L13Q9BXK5 485 aa32.42■■■□□ 2.78
U2AF1-201ENST00000291552 PODXL2Q9NZ53 605 aa32.42■■■□□ 2.78
U2AF1-201ENST00000291552 SALL2Q9Y467 1007 aaPredicted RBP32.42■■■□□ 2.78
U2AF1-201ENST00000291552 RTL9Q8NET4 1388 aa32.42■■■□□ 2.78
U2AF1-201ENST00000291552 THSD7BQ9C0I4 1608 aa32.41■■■□□ 2.78
U2AF1-201ENST00000291552 PSMD14O00487 310 aa32.41■■■□□ 2.78
U2AF1-201ENST00000291552 SLC4A2P04920 1241 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms