RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
TMED6-201ENST00000288025 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
TMED6-201ENST00000288025 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
TMED6-201ENST00000288025 TBC1D9BQ66K14 1250 aa11.71□□□□□ -0.53
TMED6-201ENST00000288025 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
TMED6-201ENST00000288025 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
TMED6-201ENST00000288025 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
TMED6-201ENST00000288025 A1BGP04217 495 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
TMED6-201ENST00000288025 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
TMED6-201ENST00000288025 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
TMED6-201ENST00000288025 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
TMED6-201ENST00000288025 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
TMED6-201ENST00000288025 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 SLX4Q8IY92 1834 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 GLTPD2A6NH11 291 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 C21orf2O43822 256 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 MCM10Q7L590 875 aa11.68□□□□□ -0.54
TMED6-201ENST00000288025 PPP2R1AP30153 589 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 FOSBP53539 338 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 PTPN5P54829 565 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
TMED6-201ENST00000288025 NUP98P52948 1817 aa11.67□□□□□ -0.54
TMED6-201ENST00000288025 SCN4AP35499 1836 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
TMED6-201ENST00000288025 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 PTPREP23469 700 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
TMED6-201ENST00000288025 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 PRPF40BQ6NWY9 871 aaKnown RBP11.66□□□□□ -0.54
TMED6-201ENST00000288025 KLRG1Q96E93 195 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 EMILIN3Q9NT22 766 aa11.66□□□□□ -0.54
TMED6-201ENST00000288025 BHMG1C9JSJ3 638 aaPredicted RBP11.65□□□□□ -0.54
TMED6-201ENST00000288025 NFKBIEO00221 500 aa11.65□□□□□ -0.54
TMED6-201ENST00000288025 CCDC93Q567U6 631 aa11.65□□□□□ -0.54
TMED6-201ENST00000288025 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
TMED6-201ENST00000288025 TPTE2Q6XPS3 522 aa11.65□□□□□ -0.54
TMED6-201ENST00000288025 KIF6Q6ZMV9 814 aa11.65□□□□□ -0.54
TMED6-201ENST00000288025 PNISRQ8TF01 805 aaKnown RBP11.65□□□□□ -0.54
TMED6-201ENST00000288025 NIP7Q9Y221 180 aaKnown RBP eCLIP11.65□□□□□ -0.54
TMED6-201ENST00000288025 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 KCNQ3O43525 872 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 RGS20O76081 388 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
TMED6-201ENST00000288025 USP16Q9Y5T5 823 aa11.64□□□□□ -0.55
TMED6-201ENST00000288025 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 SRGNP10124 158 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 NPR1P16066 1061 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 HTRA3P83110 453 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 E2F4Q16254 413 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 ZBED2Q9BTP6 218 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 NYXQ9GZU5 481 aa11.63□□□□□ -0.55
TMED6-201ENST00000288025 GOLGA8CPA6NN73 597 aa11.62□□□□□ -0.55
TMED6-201ENST00000288025 THSD4Q6ZMP0 1018 aa11.62□□□□□ -0.55
TMED6-201ENST00000288025 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
TMED6-201ENST00000288025 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
TMED6-201ENST00000288025 ANKRD36CQ5JPF3 1778 aa11.62□□□□□ -0.55
TMED6-201ENST00000288025 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
TMED6-201ENST00000288025 ALDH1B1P30837 517 aa11.61□□□□□ -0.55
TMED6-201ENST00000288025 RPGRQ92834 1020 aaKnown RBP11.61□□□□□ -0.55
TMED6-201ENST00000288025 RTKN2Q8IZC4 609 aa11.6□□□□□ -0.55
TMED6-201ENST00000288025 DNAJC5GQ8N7S2 189 aa11.6□□□□□ -0.55
TMED6-201ENST00000288025 EVI5O60447 810 aa11.59□□□□□ -0.55
TMED6-201ENST00000288025 MYL6BP14649 208 aa11.59□□□□□ -0.55
TMED6-201ENST00000288025 PRELPP51888 382 aa11.59□□□□□ -0.55
TMED6-201ENST00000288025 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
TMED6-201ENST00000288025 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
TMED6-201ENST00000288025 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
TMED6-201ENST00000288025 ZDHHC16Q969W1 377 aa11.59□□□□□ -0.55
TMED6-201ENST00000288025 RRP7AQ9Y3A4 280 aaKnown RBP11.59□□□□□ -0.55
TMED6-201ENST00000288025 DDNO94850 711 aaPredicted RBP11.58□□□□□ -0.56
TMED6-201ENST00000288025 LMOD3Q0VAK6 560 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 EAPPQ56P03 285 aaPredicted RBP11.58□□□□□ -0.56
TMED6-201ENST00000288025 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 JDP2Q8WYK2 163 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 WNT2BQ93097 391 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 MIS18AQ9NYP9 233 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 TSPYL4Q9UJ04 414 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
TMED6-201ENST00000288025 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
TMED6-201ENST00000288025 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
TMED6-201ENST00000288025 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
TMED6-201ENST00000288025 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
TMED6-201ENST00000288025 ZNF277Q9NRM2 450 aaPredicted RBP11.57□□□□□ -0.56
TMED6-201ENST00000288025 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
TMED6-201ENST00000288025 NBPF26B4DH59 902 aa11.56□□□□□ -0.56
TMED6-201ENST00000288025 ERVV-1B6SEH8 477 aa11.56□□□□□ -0.56
TMED6-201ENST00000288025 GPTP24298 496 aa11.56□□□□□ -0.56
TMED6-201ENST00000288025 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms